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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0102259 |
| Transcript ID | Lj0g3v0102259.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: GTP-binding protein At3g49725, chloroplastic-like [Cicer arietinum] gi|502098523|ref|XP_004491256.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 318 | 318 | – | – | |
| PANTHER | 57 | 213 | 157 | 3.90E-154 | – | |
| PANTHER | 57 | 213 | 157 | 3.90E-154 | ||
| Coils | 65 | 85 | 21 | – | – | |
| Pfam | 109 | 178 | 70 | 5.60E-12 | ||
| TIGRFAM | 109 | 458 | 350 | 5.00E-76 | ||
| SUPERFAMILY | 166 | 309 | 144 | 8.09E-20 | ||
| Pfam | 181 | 277 | 97 | 3.50E-16 | ||
| PANTHER | 231 | 314 | 84 | 3.90E-154 | ||
| PANTHER | 231 | 314 | 84 | 3.90E-154 | – | |
| CDD | 242 | 453 | 212 | 2.94E-66 | ||
| Gene3D | 290 | 451 | 162 | 5.10E-20 | ||
| Pfam | 291 | 435 | 145 | 1.60E-09 | ||
| Phobius | 319 | 338 | 20 | – | – | |
| PANTHER | 335 | 461 | 127 | 3.90E-154 | – | |
| PANTHER | 335 | 461 | 127 | 3.90E-154 | ||
| Phobius | 339 | 603 | 265 | – | – | |
| ProSiteProfiles | 341 | 570 | 230 | 30.789 | ||
| SUPERFAMILY | 343 | 463 | 121 | 8.09E-20 | ||
| MobiDBLite | 442 | 478 | 37 | – | – | |
| MobiDBLite | 512 | 544 | 33 | – | – | |
| PANTHER | 532 | 566 | 35 | 3.90E-154 | ||
| PANTHER | 532 | 566 | 35 | 3.90E-154 | – | |
| SUPERFAMILY | 537 | 563 | 27 | 8.09E-20 | ||
| Gene3D | 538 | 569 | 32 | 5.10E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj0g3v0102259.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0102259.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.