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Lj0g3v0117369.1

Overview

Field Value
Gene ID Lj0g3v0117369
Transcript ID Lj0g3v0117369.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502152578|ref|XP_004508991.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51718
1 161 161 27.466
IPR030381
MobiDBLite
mobidb-lite
1 21 21 – –
PANTHER
PTHR11566:SF77
1 161 161 1.80E-93 –
SMART
SM00053
1 147 147 1.70E-10
IPR001401
PANTHER
PTHR11566
1 161 161 1.80E-93
IPR022812
SUPERFAMILY
SSF52540
2 160 159 5.30E-32
IPR027417
Gene3D
G3DSA:3.40.50.300
2 161 160 4.00E-59
IPR027417
Pfam
PF00350
2 111 110 7.80E-24
IPR022812
CDD
cd08771
2 161 160 1.30E-61 –
PRINTS
PR00195
31 48 18 9.20E-21
IPR022812
PRINTS
PR00195
81 99 19 9.20E-21
IPR022812
PRINTS
PR00195
100 116 17 9.20E-21
IPR022812
Pfam
PF01031
121 161 41 7.50E-08
IPR000375

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0117369.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0117369.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.