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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001401
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We have found 48 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.250s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0106329.1
n.a. Interferon-induced GTP-binding protein Mx [Medicago truncatula] gi|357519157|ref|XP_003629867.1| chr0 45712952 45715310 +
2 domain predictions
2 GO terms
Lj0g3v0117369.1
n.a. PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502152578|ref|XP_004508991.1| chr0 51754221 51756258 -
2 domain predictions
2 GO terms
Lj0g3v0199559.2
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356522123|ref|XP_003529699.1| chr0 97966111 97995708 -
2 domain predictions
2 GO terms
Lj1g3v3608410.1
n.a. PREDICTED: dynamin-related protein 1E-like isoform 1 [Glycine max] gi|356527252|ref|XP_003532226.1| chr1 41564436 41570974 +
2 domain predictions
2 GO terms
Lj3g3v0429690.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502155333|ref|XP_004510036.1| chr3 4436833 4443347 -
2 domain predictions
2 GO terms
Lj3g3v0462040.1
n.a. dynamin homolog [Astragalus sinicus] gi|6625788|gb|AAF19398.1|AF203882_1 chr3 5059703 5071377 -
2 domain predictions
2 GO terms
Lj3g3v0618160.1
n.a. PREDICTED: dynamin-related protein 1E-like isoform 1 [Glycine max] gi|356520720|ref|XP_003529008.1| chr3 6741577 6748757 -
2 domain predictions
2 GO terms
Lj3g3v0618160.2
n.a. PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502155644|ref|XP_004510142.1| chr3 6741577 6749466 -
2 domain predictions
2 GO terms
Lj4g3v0000080.1
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356563206|ref|XP_003549855.1| chr4 61734 98073 +
2 domain predictions
2 GO terms
Lj4g3v0336850.2
n.a. PREDICTED: dynamin-like protein ARC5-like [Glycine max] gi|356524868|ref|XP_003531050.1| chr4 4192113 4200088 -
2 domain predictions
2 GO terms
Lj4g3v0336850.3
n.a. PREDICTED: dynamin-like protein ARC5-like [Glycine max] gi|356524868|ref|XP_003531050.1| chr4 4192113 4200088 -
2 domain predictions
2 GO terms
Lj4g3v0386160.2
n.a. PREDICTED: dynamin-related protein 3A-like [Glycine max] gi|356519473|ref|XP_003528397.1| chr4 5033645 5041332 +
2 domain predictions
2 GO terms
Lj4g3v2618590.1
n.a. PREDICTED: dynamin-related protein 4C-like [Cicer arietinum] gi|502140569|ref|XP_004504261.1| chr4 35658036 35661146 -
2 domain predictions
2 GO terms
Lj4g3v2618610.1
n.a. PREDICTED: dynamin-related protein 4C-like [Cicer arietinum] gi|502140569|ref|XP_004504261.1| chr4 35668626 35669270 -
2 domain predictions
2 GO terms
Lj4g3v3004140.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502139021|ref|XP_004503616.1| chr4 39882253 39887648 +
2 domain predictions
2 GO terms
Lj4g3v3113200.1
n.a. PREDICTED: dynamin-related protein 1C-like isoform X1 [Cicer arietinum] gi|502138270|ref|XP_004503345.1| chr4 41611357 41618187 +
2 domain predictions
2 GO terms
Lj6g3v2192350.1
n.a. PREDICTED: dynamin-related protein 3A-like [Glycine max] gi|356554800|ref|XP_003545730.1| chr6 25332397 25341215 -
2 domain predictions
2 GO terms
LotjaGi1g1v0191800.1
n.a. Dynamin family protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|G7L7C0|G7L7C0_MEDTR Dynamin 4C-like protein; Found in the gene: LotjaGi1g1v0191800 LjG1.1_chr1 37920870 37923351 -
3 domain predictions
2 GO terms
LotjaGi1g1v0597700.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 LjG1.1_chr1 113727320 113734554 +
3 domain predictions
2 GO terms
LotjaGi1g1v0597700.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 LjG1.1_chr1 113727562 113733750 +
3 domain predictions
2 GO terms
LotjaGi1g1v0720000_LC.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A; TrEMBL-Plants: tr|I3SR93|I3SR93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0720000_LC LjG1.1_chr1 129033783 129036725 +
3 domain predictions
2 GO terms
LotjaGi1g1v0720000_LC.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A; TrEMBL-Plants: tr|I3SR93|I3SR93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0720000_LC LjG1.1_chr1 129033786 129036730 +
3 domain predictions
2 GO terms
LotjaGi2g1v0442100.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A151SCZ5|A0A151SCZ5_CAJCA Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807665 93814071 +
3 domain predictions
2 GO terms
LotjaGi2g1v0442100.2
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0B2QVL7|A0A0B2QVL7_GLYSO Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
3 domain predictions
2 GO terms
LotjaGi2g1v0442100.3
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0L9TH92|A0A0L9TH92_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
3 domain predictions
2 GO terms
LotjaGi2g1v0442100.4
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A151SCZ5|A0A151SCZ5_CAJCA Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
3 domain predictions
2 GO terms
LotjaGi3g1v0047100.1
n.a. Dynamin family protein; TAIR: AT1G53140.1 Dynamin related protein 5A; Swiss-Prot: sp|F4HPR5|DRP5A_ARATH Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A072U158|A0A072U158_MEDTR Dynamin 5A-like protein; Found in the gene: LotjaGi3g1v0047100 LjG1.1_chr3 5016547 5022969 -
3 domain predictions
2 GO terms
LotjaGi3g1v0054800.1
n.a. Dynamin homolog; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|Q9SDX4|Q9SDX4_ASTSI Dynamin homolog; Found in the gene: LotjaGi3g1v0054800 LjG1.1_chr3 5716872 5729123 -
3 domain predictions
2 GO terms
LotjaGi3g1v0054800.2
n.a. Dynamin homolog; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1LVI3|I1LVI3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054800 LjG1.1_chr3 5717941 5728804 -
3 domain predictions
2 GO terms
LotjaGi3g1v0054800.3
n.a. Dynamin homolog; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1LVI3|I1LVI3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054800 LjG1.1_chr3 5724890 5728804 -
3 domain predictions
2 GO terms
LotjaGi3g1v0073000.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7996556 8005092 -
3 domain predictions
2 GO terms
LotjaGi3g1v0073000.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004885 -
3 domain predictions
2 GO terms
LotjaGi3g1v0073000.3
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004885 -
3 domain predictions
2 GO terms
LotjaGi3g1v0073000.4
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 LjG1.1_chr3 7997406 8004888 -
3 domain predictions
2 GO terms
LotjaGi3g1v0395300.1
n.a. Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79523901 79531554 -
3 domain predictions
2 GO terms
LotjaGi3g1v0395300.2
n.a. Dynamin; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B; TrEMBL-Plants: tr|A0A0L9T6L3|A0A0L9T6L3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79524419 79531313 -
3 domain predictions
2 GO terms
LotjaGi3g1v0395300.3
n.a. Dynamin, putative; TAIR: AT3G61760.1 DYNAMIN-like 1B; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0S3SYT0|A0A0S3SYT0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0395300 LjG1.1_chr3 79524419 79531313 -
3 domain predictions
2 GO terms
LotjaGi4g1v0001200.1
n.a. Dynamin family protein; TAIR: AT1G59610.1 dynamin-like 3; Swiss-Prot: sp|Q9LQ55|DRP2B_ARATH Dynamin-2B; TrEMBL-Plants: tr|I1MQT0|I1MQT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0001200 LjG1.1_chr4 232251 267769 +
2 domain predictions
2 GO terms
LotjaGi4g1v0032700.1
n.a. Dynamin family protein, putative, expressed; TAIR: AT3G19720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84N64|ARC5_ARATH Dynamin-like protein ARC5; TrEMBL-Plants: tr|A0A072UN67|A0A072UN67_MEDTR Dynamin-related protein 5B-2; Found in the gene: LotjaGi4g1v0032700 LjG1.1_chr4 3993338 4004367 -
3 domain predictions
2 GO terms
LotjaGi4g1v0040300.1
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|K7L2I2|K7L2I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0040300 LjG1.1_chr4 4757486 4766768 +
3 domain predictions
2 GO terms
LotjaGi4g1v0191000.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151R3B5|A0A151R3B5_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi4g1v0191000 LjG1.1_chr4 43720590 43726033 +
3 domain predictions
2 GO terms
LotjaGi4g1v0435900.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I1K693|I1K693_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900049 80905871 +
3 domain predictions
2 GO terms
LotjaGi4g1v0435900.2
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I1K693|I1K693_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900505 80905485 +
3 domain predictions
2 GO terms
LotjaGi4g1v0435900.3
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0B2Q5E1|A0A0B2Q5E1_GLYSO Dynamin-related protein 5A; Found in the gene: LotjaGi4g1v0435900 LjG1.1_chr4 80900505 80905485 +
3 domain predictions
2 GO terms
LotjaGi4g1v0457600.1
n.a. Dynamin; TAIR: AT1G14830.1 DYNAMIN-like 1C; Swiss-Prot: sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C; TrEMBL-Plants: tr|G7LBF4|G7LBF4_MEDTR Dynamin-like protein 1E; Found in the gene: LotjaGi4g1v0457600 LjG1.1_chr4 82886459 82894088 +
3 domain predictions
2 GO terms
LotjaGi4g1v0457600.2
n.a. Dynamin; TAIR: AT1G14830.1 DYNAMIN-like 1C; Swiss-Prot: sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C; TrEMBL-Plants: tr|G7LBF4|G7LBF4_MEDTR Dynamin-like protein 1E; Found in the gene: LotjaGi4g1v0457600 LjG1.1_chr4 82886910 82893523 +
2 domain predictions
2 GO terms
LotjaGi6g1v0348900.1
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|I1ME12|I1ME12_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0348900 LjG1.1_chr6 66157093 66167141 -
3 domain predictions
2 GO terms
LotjaGi6g1v0348900.2
n.a. Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|V7BTI1|V7BTI1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0348900 LjG1.1_chr6 66158641 66166872 -
3 domain predictions
2 GO terms