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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0119429 |
| Transcript ID | Lj0g3v0119429.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cicer arietinum] gi|502176643|ref|XP_004515908.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 33 | 596 | 564 | 1.30E-280 | – | |
| PANTHER | 33 | 596 | 564 | 1.30E-280 | – | |
| ProSiteProfiles | 111 | 145 | 35 | 6.566 | ||
| ProSiteProfiles | 146 | 176 | 31 | 6.632 | ||
| ProSiteProfiles | 177 | 211 | 35 | 11.345 | ||
| Pfam | 177 | 224 | 48 | 1.60E-08 | ||
| TIGRFAM | 179 | 213 | 35 | 2.90E-07 | ||
| ProSiteProfiles | 249 | 279 | 31 | 6.412 | ||
| Pfam | 254 | 272 | 19 | 0.82 | ||
| SUPERFAMILY | 267 | 411 | 145 | 7.97E-05 | ||
| ProSiteProfiles | 282 | 312 | 31 | 8.934 | ||
| Gene3D | 282 | 419 | 138 | 1.30E-09 | ||
| TIGRFAM | 285 | 314 | 30 | 1.20E-05 | ||
| Pfam | 285 | 313 | 29 | 2.50E-05 | ||
| ProSiteProfiles | 313 | 347 | 35 | 12.912 | ||
| TIGRFAM | 315 | 349 | 35 | 7.60E-08 | ||
| Pfam | 315 | 344 | 30 | 5.70E-08 | ||
| ProSiteProfiles | 385 | 415 | 31 | 5.492 | ||
| ProSiteProfiles | 418 | 452 | 35 | 10.545 | ||
| Pfam | 418 | 464 | 47 | 2.00E-08 | ||
| TIGRFAM | 421 | 453 | 33 | 3.90E-06 | ||
| ProSiteProfiles | 453 | 488 | 36 | 7.136 | ||
| ProSiteProfiles | 489 | 519 | 31 | 5.525 | ||
| ProSiteProfiles | 521 | 555 | 35 | 5.656 | ||
| Gene3D | 522 | 576 | 55 | 1.30E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0119429.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0119429.1, powered by CORGI.
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