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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0133769 |
| Transcript ID | Lj0g3v0133769.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi|356564834|ref|XP_003550652.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 92 | 92 | – | – | |
| Gene3D | 6 | 71 | 66 | 4.20E-07 | – | |
| SUPERFAMILY | 8 | 75 | 68 | 6.81E-10 | ||
| PANTHER | 10 | 399 | 390 | 7.30E-171 | – | |
| PANTHER | 10 | 399 | 390 | 7.30E-171 | – | |
| ProSiteProfiles | 11 | 77 | 67 | 13.783 | ||
| PRINTS | 14 | 23 | 10 | 6.70E-05 | ||
| Phobius | 93 | 110 | 18 | – | – | |
| TMHMM | 108 | 130 | 23 | – | – | |
| Phobius | 111 | 115 | 5 | – | – | |
| Phobius | 116 | 134 | 19 | – | – | |
| Phobius | 135 | 140 | 6 | – | – | |
| Phobius | 141 | 157 | 17 | – | – | |
| SUPERFAMILY | 143 | 197 | 55 | 7.59E-19 | – | |
| Gene3D | 143 | 292 | 150 | 2.10E-26 | ||
| TMHMM | 145 | 176 | 32 | – | – | |
| Phobius | 158 | 162 | 5 | – | – | |
| Phobius | 163 | 182 | 20 | – | – | |
| Pfam | 165 | 383 | 219 | 1.40E-58 | ||
| TIGRFAM | 166 | 399 | 234 | 2.00E-36 | ||
| PRINTS | 178 | 198 | 21 | 6.70E-05 | ||
| Phobius | 183 | 310 | 128 | – | – | |
| SUPERFAMILY | 206 | 291 | 86 | 1.44E-21 | – | |
| PRINTS | 257 | 273 | 17 | 6.70E-05 | ||
| PRINTS | 276 | 290 | 15 | 6.70E-05 | ||
| SUPERFAMILY | 292 | 386 | 95 | 7.59E-19 | – | |
| TMHMM | 308 | 330 | 23 | – | – | |
| Phobius | 311 | 330 | 20 | – | – | |
| Phobius | 331 | 341 | 11 | – | – | |
| Phobius | 342 | 366 | 25 | – | – | |
| TMHMM | 345 | 367 | 23 | – | – | |
| Gene3D | 367 | 399 | 33 | 1.50E-05 | ||
| Phobius | 367 | 399 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Cation-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in). | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj0g3v0133769.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0133769.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.