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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR027256
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We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.407s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0126429.2
n.a. PREDICTED: copper-transporting ATPase RAN1-like isoform X2 [Cicer arietinum] gi|502141831|ref|XP_004504660.1| chr0 56884150 56888752 +
2 domain predictions
3 GO terms
Lj0g3v0133769.1
n.a. PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi|356564834|ref|XP_003550652.1| chr0 61252549 61258969 +
2 domain predictions
3 GO terms
Lj1g3v0695110.1
n.a. PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cicer arietinum] gi|502142103|ref|XP_004504792.1| chr1 8997172 9005083 -
2 domain predictions
3 GO terms
Lj1g3v1788240.1
n.a. copper P1B-ATPase [Glycine max] gi|110630091|gb|ABD64063.1| chr1 21409305 21418458 +
2 domain predictions
3 GO terms
Lj1g3v1788240.2
n.a. copper P1B-ATPase [Glycine max] gi|110630091|gb|ABD64063.1| chr1 21409305 21418458 +
2 domain predictions
3 GO terms
Lj2g3v2017610.1
n.a. Heavy metal atpase 5 [Theobroma cacao] gi|508777445|gb|EOY24701.1| chr2 30921746 30925742 +
2 domain predictions
3 GO terms
Lj2g3v2017620.1
n.a. Heavy metal P-type ATPase [Medicago truncatula] gi|357518503|ref|XP_003629540.1| chr2 30927788 30932465 +
2 domain predictions
3 GO terms
Lj3g3v0718340.1
n.a. Heavy metal ATPase [Medicago truncatula] gi|357513319|ref|XP_003626948.1| chr3 7812257 7818994 +
2 domain predictions
3 GO terms
Lj3g3v3243170.1
n.a. Heavy metal ATPase [Medicago truncatula] gi|357513319|ref|XP_003626948.1| chr3 40033926 40035912 +
2 domain predictions
3 GO terms
Lj4g3v0341080.1
n.a. PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cicer arietinum] gi|502142103|ref|XP_004504792.1| chr4 4529082 4549833 -
2 domain predictions
3 GO terms
Lj4g3v0805580.1
n.a. PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic-like [Cicer arietinum] gi|502152805|ref|XP_004509102.1| chr4 12625526 12633930 +
2 domain predictions
3 GO terms
Lj4g3v2133900.1
n.a. PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi|356550732|ref|XP_003543738.1| chr4 29269686 29278261 +
2 domain predictions
3 GO terms
Lj6g3v1371840.1
n.a. PREDICTED: cadmium/zinc-transporting ATPase 3-like [Glycine max] gi|356532650|ref|XP_003534884.1| chr6 16252720 16263307 -
2 domain predictions
3 GO terms
LotjaGi1g1v0371400.1
n.a. Copper-transporting ATPase; TAIR: AT5G21930.1 P-type ATPase of Arabidopsis 2; Swiss-Prot: sp|B9DFX7|HMA8_ARATH Copper-transporting ATPase PAA2, chloroplastic; TrEMBL-Plants: tr|A7ISW5|A7ISW5_SOYBN Copper P1B-ATPase; Found in the gene: LotjaGi1g1v0371400 LjG1.1_chr1 84949786 84959935 +
2 domain predictions
3 GO terms
LotjaGi2g1v0433300.1
n.a. Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp|Q9SH30|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr|G7KDC8|G7KDC8_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi2g1v0433300 LjG1.1_chr2 93019405 93024347 +
2 domain predictions
3 GO terms
LotjaGi2g1v0433500.1
n.a. Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp|Q9SH30|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr|A0A1J7G3K0|A0A1J7G3K0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433500 LjG1.1_chr2 93025417 93032449 +
2 domain predictions
3 GO terms
LotjaGi3g1v0088800.2
n.a. Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp|Q9SH30|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr|A0A0B2SKR1|A0A0B2SKR1_GLYSO Putative copper-transporting ATPase 3; Found in the gene: LotjaGi3g1v0088800 LjG1.1_chr3 10057142 10063364 -
2 domain predictions
3 GO terms
LotjaGi3g1v0088800.3
n.a. Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp|Q9SH30|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr|G7LF66|G7LF66_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi3g1v0088800 LjG1.1_chr3 10057142 10063451 -
2 domain predictions
3 GO terms
LotjaGi3g1v0493500.1
n.a. Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp|Q9SH30|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr|A0A0B2SKR1|A0A0B2SKR1_GLYSO Putative copper-transporting ATPase 3; Found in the gene: LotjaGi3g1v0493500 LjG1.1_chr3 91192919 91198259 +
2 domain predictions
3 GO terms
LotjaGi4g1v0020900.1
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A072V003|A0A072V003_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi4g1v0020900 LjG1.1_chr4 2583281 2589758 -
2 domain predictions
3 GO terms
LotjaGi4g1v0020900.2
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A072V003|A0A072V003_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi4g1v0020900 LjG1.1_chr4 2584447 2589487 -
2 domain predictions
3 GO terms
LotjaGi4g1v0034800.1
n.a. Copper-transporting ATPase; TAIR: AT4G33520.2 P-type ATP-ase 1; Swiss-Prot: sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic; TrEMBL-Plants: tr|A0A0R0JZ81|A0A0R0JZ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0034800 LjG1.1_chr4 4210712 4238232 -
2 domain predictions
3 GO terms
LotjaGi4g1v0034800.2
n.a. Copper-transporting ATPase; TAIR: AT4G33520.2 P-type ATP-ase 1; Swiss-Prot: sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic; TrEMBL-Plants: tr|I1KR29|I1KR29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0034800 LjG1.1_chr4 4210712 4238232 -
2 domain predictions
3 GO terms
LotjaGi4g1v0100100.1
n.a. Copper-transporting ATPase; TAIR: AT4G37270.1 heavy metal atpase 1; Swiss-Prot: sp|Q9M3H5|HMA1_ARATH Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic; TrEMBL-Plants: tr|A0A0B2P4P0|A0A0B2P4P0_GLYSO Putative cadmium/zinc-transporting ATPase HMA1, chloroplastic; Found in the gene: LotjaGi4g1v0100100 LjG1.1_chr4 13635200 13644790 +
2 domain predictions
3 GO terms
LotjaGi4g1v0304700.1
n.a. Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr|A0A0B2QSM7|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700 LjG1.1_chr4 67996494 68006279 +
2 domain predictions
3 GO terms
LotjaGi4g1v0304700.2
n.a. Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr|A0A0B2QSM7|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700 LjG1.1_chr4 67996585 68006092 +
2 domain predictions
3 GO terms
LotjaGi4g1v0304800.1
n.a. Zinc-transporting ATPase; TAIR: AT2G19110.1 heavy metal atpase 4; Swiss-Prot: sp|O64474|HMA4_ARATH Putative cadmium/zinc-transporting ATPase HMA4; TrEMBL-Plants: tr|K7LWU0|K7LWU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0304800 LjG1.1_chr4 68022135 68030862 +
2 domain predictions
3 GO terms
LotjaGi6g1v0241300.1
n.a. Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr|A0A151RDQ6|A0A151RDQ6_CAJCA Putative cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi6g1v0241300 LjG1.1_chr6 55308881 55317500 -
2 domain predictions
3 GO terms
LotjaGi6g1v0243100.1
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562281 55569723 +
2 domain predictions
3 GO terms
LotjaGi6g1v0243100.2
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562413 55568201 +
2 domain predictions
3 GO terms
LotjaGi6g1v0243100.3
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562413 55568201 +
2 domain predictions
3 GO terms