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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0140499 |
| Transcript ID | Lj0g3v0140499.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like isoform X1 [Cicer arietinum] gi|502123558|ref|XP_004498166.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 33 | 67 | 35 | 9.131 | ||
| PANTHER | 34 | 231 | 198 | 1.10E-94 | – | |
| TIGRFAM | 35 | 61 | 27 | 0.0012 | ||
| Pfam | 35 | 61 | 27 | 0.0022 | ||
| Gene3D | 44 | 136 | 93 | 6.70E-04 | ||
| Pfam | 67 | 176 | 110 | 1.50E-13 | ||
| ProSiteProfiles | 106 | 140 | 35 | 11.981 | ||
| TIGRFAM | 109 | 140 | 32 | 2.40E-06 | ||
| ProSiteProfiles | 141 | 175 | 35 | 9.865 | ||
| TIGRFAM | 144 | 177 | 34 | 1.20E-06 | ||
| Gene3D | 174 | 284 | 111 | 6.70E-04 | ||
| ProSiteProfiles | 176 | 210 | 35 | 11.411 | ||
| Pfam | 179 | 207 | 29 | 2.40E-04 | ||
| TIGRFAM | 179 | 210 | 32 | 5.50E-06 | ||
| ProSiteProfiles | 211 | 245 | 35 | 9.624 | ||
| Pfam | 214 | 243 | 30 | 0.043 | ||
| TIGRFAM | 214 | 245 | 32 | 0.0011 | ||
| Pfam | 253 | 300 | 48 | 7.20E-11 | ||
| PANTHER | 253 | 334 | 82 | 1.10E-94 | – | |
| ProSiteProfiles | 254 | 288 | 35 | 10.698 | ||
| TIGRFAM | 256 | 283 | 28 | 5.80E-04 | ||
| ProSiteProfiles | 289 | 319 | 31 | 8.155 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0140499.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0140499.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.