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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0167179 |
| Transcript ID | Lj0g3v0167179.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g12100, mitochondrial-like [Glycine max] gi|356503775|ref|XP_003520679.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 182 | 182 | 7.40E-170 | – | |
| PANTHER | 1 | 182 | 182 | 7.40E-170 | – | |
| ProSiteProfiles | 9 | 43 | 35 | 9.109 | ||
| TIGRFAM | 14 | 45 | 32 | 1.80E-04 | ||
| Pfam | 32 | 88 | 57 | 7.50E-09 | ||
| ProSiteProfiles | 44 | 78 | 35 | 7.498 | ||
| ProSiteProfiles | 79 | 113 | 35 | 12.222 | ||
| TIGRFAM | 82 | 115 | 34 | 2.50E-09 | ||
| Gene3D | 96 | 131 | 36 | 3.60E-05 | ||
| Pfam | 113 | 162 | 50 | 2.70E-18 | ||
| ProSiteProfiles | 114 | 148 | 35 | 12.562 | ||
| TIGRFAM | 116 | 142 | 27 | 2.00E-08 | ||
| ProSiteProfiles | 149 | 183 | 35 | 12.584 | ||
| TIGRFAM | 151 | 183 | 33 | 1.60E-08 | ||
| PANTHER | 212 | 384 | 173 | 7.40E-170 | – | |
| PANTHER | 212 | 384 | 173 | 7.40E-170 | – | |
| ProSiteProfiles | 213 | 247 | 35 | 13.285 | ||
| Pfam | 213 | 237 | 25 | 2.60E-07 | ||
| TIGRFAM | 216 | 248 | 33 | 3.90E-09 | ||
| Gene3D | 216 | 344 | 129 | 3.60E-05 | ||
| SUPERFAMILY | 220 | 351 | 132 | 2.62E-08 | – | |
| Pfam | 247 | 295 | 49 | 1.30E-14 | ||
| ProSiteProfiles | 248 | 282 | 35 | 12.693 | ||
| TIGRFAM | 250 | 283 | 34 | 9.20E-09 | ||
| ProSiteProfiles | 283 | 317 | 35 | 12.419 | ||
| TIGRFAM | 285 | 318 | 34 | 2.00E-08 | ||
| ProSiteProfiles | 318 | 352 | 35 | 11.422 | ||
| Pfam | 320 | 366 | 47 | 9.50E-12 | ||
| TIGRFAM | 321 | 354 | 34 | 2.20E-08 | ||
| ProSiteProfiles | 353 | 384 | 32 | 9.756 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0167179.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0167179.1, powered by CORGI.
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