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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0236989 |
| Transcript ID | Lj0g3v0236989.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma cacao] gi|508719012|gb|EOY10909.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 28 | 28 | 5 | – | |
| ProSiteProfiles | 62 | 96 | 35 | 7.256 | ||
| PANTHER | 66 | 557 | 492 | 0 | – | |
| PANTHER | 66 | 557 | 492 | 0 | – | |
| TIGRFAM | 74 | 98 | 25 | 0.0013 | ||
| ProSiteProfiles | 97 | 127 | 31 | 6.544 | ||
| Pfam | 130 | 179 | 50 | 1.10E-19 | ||
| ProSiteProfiles | 131 | 165 | 35 | 13.833 | ||
| TIGRFAM | 134 | 167 | 34 | 4.60E-10 | ||
| ProSiteProfiles | 166 | 200 | 35 | 12.54 | ||
| TIGRFAM | 168 | 202 | 35 | 9.00E-09 | ||
| ProSiteProfiles | 201 | 235 | 35 | 10.885 | ||
| TIGRFAM | 203 | 236 | 34 | 2.60E-04 | ||
| Pfam | 232 | 261 | 30 | 2.60E-08 | ||
| ProSiteProfiles | 236 | 270 | 35 | 10.994 | ||
| TIGRFAM | 239 | 272 | 34 | 5.80E-05 | ||
| Pfam | 270 | 319 | 50 | 2.20E-18 | ||
| ProSiteProfiles | 271 | 305 | 35 | 13.011 | ||
| Gene3D | 271 | 469 | 199 | 2.80E-08 | ||
| TIGRFAM | 273 | 307 | 35 | 9.30E-10 | ||
| ProSiteProfiles | 306 | 340 | 35 | 13.833 | ||
| TIGRFAM | 308 | 342 | 35 | 2.20E-10 | ||
| Pfam | 337 | 368 | 32 | 1.10E-07 | ||
| ProSiteProfiles | 341 | 375 | 35 | 11.86 | ||
| TIGRFAM | 343 | 377 | 35 | 7.70E-08 | ||
| Pfam | 375 | 422 | 48 | 2.10E-14 | ||
| ProSiteProfiles | 376 | 410 | 35 | 13.033 | ||
| TIGRFAM | 380 | 412 | 33 | 1.00E-07 | ||
| ProSiteProfiles | 411 | 445 | 35 | 9.098 | ||
| Pfam | 445 | 494 | 50 | 2.60E-12 | ||
| ProSiteProfiles | 446 | 480 | 35 | 11.751 | ||
| TIGRFAM | 448 | 481 | 34 | 4.40E-07 | ||
| ProSiteProfiles | 481 | 515 | 35 | 10.896 | ||
| TIGRFAM | 483 | 517 | 35 | 3.30E-06 | ||
| ProSiteProfiles | 516 | 550 | 35 | 7.936 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0236989.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0236989.1, powered by CORGI.
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