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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0244049 |
| Transcript ID | Lj0g3v0244049.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Amidophosphoribosyltransferase [Medicago truncatula] gi|357473601|ref|XP_003607085.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 20 | 20 | – | – | |
| MobiDBLite | 1 | 47 | 47 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| Phobius | 5 | 13 | 9 | – | – | |
| Phobius | 14 | 20 | 7 | – | – | |
| Phobius | 21 | 577 | 557 | – | – | |
| MobiDBLite | 65 | 87 | 23 | – | – | |
| PANTHER | 86 | 544 | 459 | 0 | – | |
| PANTHER | 86 | 544 | 459 | 0 | – | |
| Hamap | 88 | 532 | 445 | 46.621 | ||
| SUPERFAMILY | 89 | 325 | 237 | 1.37E-67 | ||
| Gene3D | 89 | 332 | 244 | 3.40E-67 | ||
| ProSiteProfiles | 89 | 309 | 221 | 47.681 | ||
| CDD | 89 | 340 | 252 | 1.58E-148 | – | |
| TIGRFAM | 89 | 531 | 443 | 4.20E-153 | ||
| Pfam | 168 | 287 | 120 | 4.00E-25 | ||
| SUPERFAMILY | 325 | 536 | 212 | 5.25E-67 | ||
| Gene3D | 345 | 509 | 165 | 7.20E-43 | ||
| CDD | 352 | 463 | 112 | 3.86E-20 | ||
| Pfam | 364 | 459 | 96 | 3.50E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Amidophosphoribosyltransferase activity | Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H(2)O. | ||
| Biological process | Purine nucleobase biosynthetic process | The chemical reactions and pathways resulting in the formation of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). |
Expression pattern of Lj0g3v0244049.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0244049.1, powered by CORGI.
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