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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0261399 |
| Transcript ID | Lj0g3v0261399.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ribonuclease J-like isoform X2 [Cicer arietinum] gi|502130447|ref|XP_004500653.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 252 | 252 | 1.60E-75 | – | |
| PANTHER | 1 | 252 | 252 | 1.60E-75 | ||
| SUPERFAMILY | 5 | 79 | 75 | 1.62E-05 | ||
| Pfam | 19 | 51 | 33 | 3.60E-07 | ||
| MobiDBLite | 261 | 298 | 38 | – | – | |
| MobiDBLite | 326 | 359 | 34 | – | – | |
| Gene3D | 358 | 419 | 62 | 3.20E-04 | ||
| ProSiteProfiles | 359 | 419 | 61 | 7.631 | ||
| Pfam | 361 | 442 | 82 | 6.10E-15 | – | |
| CDD | 361 | 426 | 66 | 4.64E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj0g3v0261399.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0261399.2, powered by CORGI.
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