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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0263879 |
| Transcript ID | Lj0g3v0263879.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cicer arietinum] gi|502168689|ref|XP_004514446.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 25 | 487 | 463 | 8.70E-155 | – | |
| PANTHER | 25 | 487 | 463 | 8.70E-155 | – | |
| Gene3D | 108 | 250 | 143 | 2.60E-04 | ||
| ProSiteProfiles | 126 | 160 | 35 | 7.541 | ||
| ProSiteProfiles | 164 | 198 | 35 | 9.284 | ||
| TIGRFAM | 167 | 196 | 30 | 1.20E-05 | ||
| Pfam | 167 | 195 | 29 | 1.40E-05 | ||
| Pfam | 200 | 226 | 27 | 0.58 | ||
| ProSiteProfiles | 234 | 264 | 31 | 6.38 | ||
| SUPERFAMILY | 235 | 402 | 168 | 1.29E-06 | ||
| Gene3D | 251 | 406 | 156 | 8.00E-09 | ||
| ProSiteProfiles | 270 | 300 | 31 | 5.152 | ||
| ProSiteProfiles | 304 | 338 | 35 | 6.533 | ||
| Pfam | 307 | 332 | 26 | 1.1 | ||
| ProSiteProfiles | 339 | 373 | 35 | 8.265 | ||
| Pfam | 344 | 370 | 27 | 0.043 | ||
| ProSiteProfiles | 374 | 408 | 35 | 7.98 | ||
| Pfam | 378 | 400 | 23 | 0.048 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0263879.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0263879.1, powered by CORGI.
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