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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0267599 |
| Transcript ID | Lj0g3v0267599.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g62670, mitochondrial-like isoform X1 [Cicer arietinum] gi|502163082|ref|XP_004512719.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 30 | 539 | 510 | 1.50E-272 | – | |
| PANTHER | 30 | 539 | 510 | 1.50E-272 | – | |
| ProSiteProfiles | 51 | 85 | 35 | 7.278 | ||
| ProSiteProfiles | 86 | 120 | 35 | 9.679 | ||
| Pfam | 88 | 117 | 30 | 0.0028 | ||
| TIGRFAM | 88 | 122 | 35 | 3.10E-05 | ||
| Pfam | 120 | 169 | 50 | 5.90E-12 | ||
| ProSiteProfiles | 121 | 155 | 35 | 9.909 | ||
| TIGRFAM | 123 | 156 | 34 | 5.60E-04 | ||
| ProSiteProfiles | 156 | 190 | 35 | 11.301 | ||
| TIGRFAM | 158 | 192 | 35 | 4.30E-07 | ||
| Pfam | 188 | 218 | 31 | 3.90E-10 | ||
| ProSiteProfiles | 191 | 225 | 35 | 12.036 | ||
| TIGRFAM | 193 | 227 | 35 | 4.90E-10 | ||
| Pfam | 225 | 274 | 50 | 9.30E-18 | ||
| ProSiteProfiles | 226 | 260 | 35 | 11.86 | ||
| TIGRFAM | 228 | 262 | 35 | 2.00E-08 | ||
| ProSiteProfiles | 261 | 295 | 35 | 12.617 | ||
| TIGRFAM | 263 | 297 | 35 | 1.90E-08 | ||
| Pfam | 292 | 323 | 32 | 3.70E-08 | ||
| ProSiteProfiles | 296 | 330 | 35 | 12.244 | ||
| TIGRFAM | 299 | 332 | 34 | 9.10E-07 | ||
| Pfam | 330 | 379 | 50 | 2.90E-18 | ||
| ProSiteProfiles | 331 | 365 | 35 | 12.891 | ||
| TIGRFAM | 334 | 366 | 33 | 5.30E-11 | ||
| ProSiteProfiles | 366 | 400 | 35 | 12.112 | ||
| TIGRFAM | 368 | 401 | 34 | 5.90E-10 | ||
| Gene3D | 400 | 532 | 133 | 8.30E-04 | ||
| Pfam | 401 | 449 | 49 | 4.10E-19 | ||
| ProSiteProfiles | 401 | 435 | 35 | 12.858 | ||
| TIGRFAM | 403 | 437 | 35 | 3.80E-09 | ||
| ProSiteProfiles | 436 | 470 | 35 | 11.082 | ||
| TIGRFAM | 438 | 471 | 34 | 5.40E-04 | ||
| ProSiteProfiles | 471 | 505 | 35 | 14.063 | ||
| Pfam | 471 | 517 | 47 | 1.60E-13 | ||
| TIGRFAM | 474 | 507 | 34 | 1.00E-09 | ||
| ProSiteProfiles | 506 | 539 | 34 | 9.635 | ||
| TIGRFAM | 508 | 538 | 31 | 0.0018 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0267599.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0267599.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.