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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0283589 |
| Transcript ID | Lj0g3v0283589.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g24830-like isoform X1 [Cicer arietinum] gi|502124601|ref|XP_004498596.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 120 | 587 | 468 | 5.00E-228 | – | |
| PANTHER | 120 | 587 | 468 | 5.00E-228 | – | |
| ProSiteProfiles | 140 | 174 | 35 | 7.75 | ||
| Pfam | 170 | 196 | 27 | 3.10E-07 | ||
| ProSiteProfiles | 175 | 210 | 36 | 10.863 | ||
| TIGRFAM | 177 | 211 | 35 | 2.40E-05 | ||
| Pfam | 210 | 258 | 49 | 2.00E-16 | ||
| ProSiteProfiles | 211 | 245 | 35 | 12.617 | ||
| TIGRFAM | 213 | 246 | 34 | 1.90E-09 | ||
| ProSiteProfiles | 246 | 280 | 35 | 9.832 | ||
| TIGRFAM | 248 | 275 | 28 | 1.70E-05 | ||
| Gene3D | 248 | 293 | 46 | 2.20E-06 | ||
| ProSiteProfiles | 282 | 316 | 35 | 8.462 | ||
| Pfam | 284 | 312 | 29 | 0.022 | ||
| TIGRFAM | 287 | 318 | 32 | 3.50E-04 | ||
| Pfam | 317 | 363 | 47 | 1.30E-14 | ||
| ProSiteProfiles | 317 | 351 | 35 | 11.126 | ||
| TIGRFAM | 319 | 353 | 35 | 1.30E-06 | ||
| ProSiteProfiles | 352 | 386 | 35 | 11.345 | ||
| TIGRFAM | 354 | 388 | 35 | 8.00E-07 | ||
| ProSiteProfiles | 387 | 421 | 35 | 8.254 | ||
| Pfam | 389 | 416 | 28 | 0.084 | ||
| ProSiteProfiles | 422 | 456 | 35 | 8.934 | ||
| TIGRFAM | 424 | 458 | 35 | 8.30E-04 | ||
| Pfam | 425 | 454 | 30 | 0.051 | ||
| Gene3D | 425 | 556 | 132 | 2.20E-06 | ||
| Pfam | 456 | 505 | 50 | 1.90E-13 | ||
| ProSiteProfiles | 457 | 491 | 35 | 11.235 | ||
| TIGRFAM | 459 | 493 | 35 | 1.50E-05 | ||
| ProSiteProfiles | 492 | 526 | 35 | 11.488 | ||
| TIGRFAM | 494 | 527 | 34 | 9.60E-06 | ||
| ProSiteProfiles | 527 | 561 | 35 | 7.772 | ||
| ProSiteProfiles | 562 | 596 | 35 | 6.193 | ||
| Pfam | 568 | 591 | 24 | 0.69 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0283589.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0283589.2, powered by CORGI.
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