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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0295469 |
| Transcript ID | Lj0g3v0295469.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g73400, mitochondrial-like [Cicer arietinum] gi|502173057|ref|XP_004515244.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 162 | 594 | 433 | 2.30E-263 | – | |
| PANTHER | 162 | 594 | 433 | 2.30E-263 | – | |
| Gene3D | 258 | 536 | 279 | 6.00E-08 | ||
| ProSiteProfiles | 259 | 289 | 31 | 7.892 | ||
| TIGRFAM | 262 | 288 | 27 | 0.0015 | ||
| Pfam | 263 | 288 | 26 | 0.0012 | ||
| ProSiteProfiles | 293 | 327 | 35 | 11.159 | ||
| Pfam | 296 | 324 | 29 | 0.0036 | ||
| TIGRFAM | 296 | 328 | 33 | 4.20E-05 | ||
| Pfam | 327 | 377 | 51 | 2.20E-10 | ||
| ProSiteProfiles | 328 | 362 | 35 | 11.794 | ||
| TIGRFAM | 330 | 360 | 31 | 2.00E-07 | ||
| ProSiteProfiles | 366 | 400 | 35 | 9.81 | ||
| TIGRFAM | 369 | 402 | 34 | 2.70E-06 | ||
| ProSiteProfiles | 401 | 435 | 35 | 11.915 | ||
| Pfam | 402 | 448 | 47 | 5.50E-11 | ||
| TIGRFAM | 404 | 437 | 34 | 0.0013 | ||
| SUPERFAMILY | 415 | 573 | 159 | 4.55E-05 | ||
| ProSiteProfiles | 436 | 470 | 35 | 11.794 | ||
| TIGRFAM | 438 | 471 | 34 | 5.00E-08 | ||
| Pfam | 470 | 518 | 49 | 3.50E-13 | ||
| ProSiteProfiles | 471 | 505 | 35 | 10.687 | ||
| TIGRFAM | 474 | 506 | 33 | 1.40E-07 | ||
| ProSiteProfiles | 506 | 540 | 35 | 10.315 | ||
| TIGRFAM | 509 | 539 | 31 | 1.30E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0295469.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0295469.1, powered by CORGI.
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