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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0304579 |
| Transcript ID | Lj0g3v0304579.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: eukaryotic translation initiation factor 4G-like [Glycine max] gi|356503216|ref|XP_003520407.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 330 | 330 | 0 | – | |
| PANTHER | 1 | 330 | 330 | 0 | – | |
| MobiDBLite | 125 | 188 | 64 | – | – | |
| MobiDBLite | 260 | 306 | 47 | – | – | |
| MobiDBLite | 317 | 336 | 20 | – | – | |
| MobiDBLite | 358 | 497 | 140 | – | – | |
| PANTHER | 365 | 740 | 376 | 0 | – | |
| PANTHER | 365 | 740 | 376 | 0 | – | |
| MobiDBLite | 509 | 553 | 45 | – | – | |
| MobiDBLite | 606 | 649 | 44 | – | – | |
| MobiDBLite | 694 | 724 | 31 | – | – | |
| PANTHER | 793 | 1316 | 524 | 0 | – | |
| PANTHER | 793 | 1316 | 524 | 0 | – | |
| SUPERFAMILY | 846 | 1075 | 230 | 8.38E-70 | ||
| Gene3D | 851 | 1090 | 240 | 1.20E-84 | ||
| Pfam | 851 | 1073 | 223 | 7.10E-55 | ||
| SMART | 851 | 1073 | 223 | 7.20E-51 | ||
| Coils | 933 | 953 | 21 | – | – | |
| MobiDBLite | 943 | 967 | 25 | – | – | |
| MobiDBLite | 1092 | 1253 | 162 | – | – | |
| MobiDBLite | 1258 | 1277 | 20 | – | – | |
| Gene3D | 1280 | 1316 | 37 | 5.00E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0304579.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0304579.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.