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SM00543

Source: SMART

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Associated Lotus transcripts 33

Transcript Name Description Predicted domains Domain count
Lj0g3v0146979.1
– PREDICTED: regulator of nonsense transcripts 2-like [Glycine max] gi|356556505|ref|XP_003546565.1|
Domains
15
Lj0g3v0304579.1
– PREDICTED: eukaryotic translation initiation factor 4G-like [Glycine max] gi|356503216|ref|XP_003520407.1|
Domains
11
Lj0g3v0304589.1
–
Domains
14
Lj0g3v0326709.1
– PREDICTED: eukaryotic translation initiation factor 4G-like [Glycine max] gi|356503216|ref|XP_003520407.1|
Domains
11
Lj0g3v0326709.2
– PREDICTED: eukaryotic translation initiation factor 4G-like [Glycine max] gi|356503216|ref|XP_003520407.1|
Domains
11
Lj1g3v3904180.1
– PREDICTED: nuclear cap-binding protein subunit 1-like [Glycine max] gi|356570247|ref|XP_003553301.1|
Domains
15
Lj1g3v3975790.1
– PREDICTED: nucleolar MIF4G domain-containing protein 1-like [Glycine max] gi|356570325|ref|XP_003553340.1|
Domains
16
Lj4g3v1989860.1
– PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like isoform 2 [Glycine max] gi|356562557|ref|XP_003549536.1|
Domains
15
Lj6g3v0938260.1
– PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cicer arietinum] gi|502165076|ref|XP_004513404.1|
Domains
14
Lj6g3v1077310.2
– PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like [Glycine max] gi|356508366|ref|XP_003522928.1|
Domains
13
Lj6g3v1094850.1
– PREDICTED: regulator of nonsense transcripts 2-like [Glycine max] gi|356556505|ref|XP_003546565.1|
Domains
15
LotjaGi1g1v0327400.1
– Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr|A0A0B2RQV2|A0A0B2RQV2_GLYSO Nucleolar MIF4G domain-containing protein 1; Found in the gene: LotjaGi1g1v0327400
Domains
17
LotjaGi1g1v0327400.2
– Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr|A0A0B2RQV2|A0A0B2RQV2_GLYSO Nucleolar MIF4G domain-containing protein 1; Found in the gene: LotjaGi1g1v0327400
Domains
17
LotjaGi1g1v0646000_LC.1
– Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7HJK2|A0A1J7HJK2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0646000_LC
Domains
16
LotjaGi1g1v0646000_LC.2
– Nucleolar MIF4G domain-containing protein 1; TAIR: AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7HJK2|A0A1J7HJK2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0646000_LC
Domains
16
LotjaGi3g1v0070600.1
– Eukaryotic translation initiation factor 4G-like protein; TAIR: AT3G60240.2 eukaryotic translation initiation factor 4G; Swiss-Prot: sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G; TrEMBL-Plants: tr|K7L149|K7L149_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070600
Domains
15
LotjaGi3g1v0070800.1
– Eukaryotic translation initiation factor 4G-like protein; TAIR: AT3G60240.2 eukaryotic translation initiation factor 4G; Swiss-Prot: sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G; TrEMBL-Plants: tr|K7L149|K7L149_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070800
Domains
15
LotjaGi3g1v0070800.2
– Eukaryotic translation initiation factor 4G; TAIR: AT3G60240.2 eukaryotic translation initiation factor 4G; Swiss-Prot: sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G; TrEMBL-Plants: tr|K7LAK0|K7LAK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070800
Domains
15
LotjaGi4g1v0289300.1
– Eukaryotic translation initiation factor 4G; TAIR: AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1; TrEMBL-Plants: tr|I1MT11|I1MT11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0289300
Domains
15
LotjaGi6g1v0182000.1
– Pre-mRNA-splicing factor CWC22; TAIR: AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q9VJ87|CWC22_DROME Pre-mRNA-splicing factor CWC22 homolog; TrEMBL-Plants: tr|A0A0L9VAV7|A0A0L9VAV7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0182000
Domains
14
LotjaGi6g1v0201800.1
– Eukaryotic translation initiation factor 4G-like protein; TAIR: AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1; TrEMBL-Plants: tr|A0A151QNR0|A0A151QNR0_CAJCA Eukaryotic initiation factor iso-4F subunit p82-34; Found in the gene: LotjaGi6g1v0201800
Domains
14
LotjaGi6g1v0201800.2
– Eukaryotic translation initiation factor 4G; TAIR: AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1; TrEMBL-Plants: tr|A0A151QNR0|A0A151QNR0_CAJCA Eukaryotic initiation factor iso-4F subunit p82-34; Found in the gene: LotjaGi6g1v0201800
Domains
14
LotjaGi6g1v0201800.3
– Eukaryotic translation initiation factor 4G-like protein; TAIR: AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1; TrEMBL-Plants: tr|A0A151QNR0|A0A151QNR0_CAJCA Eukaryotic initiation factor iso-4F subunit p82-34; Found in the gene: LotjaGi6g1v0201800
Domains
14
LotjaGi6g1v0201800.4
– Eukaryotic translation initiation factor 4G-like protein; TAIR: AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1; TrEMBL-Plants: tr|A0A151QNR0|A0A151QNR0_CAJCA Eukaryotic initiation factor iso-4F subunit p82-34; Found in the gene: LotjaGi6g1v0201800
Domains
14
LotjaGi6g1v0201800.5
– Eukaryotic translation initiation factor 4G; TAIR: AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein; Swiss-Prot: sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1; TrEMBL-Plants: tr|A0A151QNR0|A0A151QNR0_CAJCA Eukaryotic initiation factor iso-4F subunit p82-34; Found in the gene: LotjaGi6g1v0201800
Domains
14
LotjaGi6g1v0212500.1
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
15
LotjaGi6g1v0212500.2
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
17
LotjaGi6g1v0212500.3
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
17
LotjaGi6g1v0212500.4
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
15
LotjaGi6g1v0212500.5
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
17
LotjaGi6g1v0212500.6
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
15
LotjaGi6g1v0212500.7
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
17
LotjaGi6g1v0212500.8
– Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500
Domains
17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 3.03