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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0308359 |
| Transcript ID | Lj0g3v0308359.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: urease-like [Cicer arietinum] gi|502135386|ref|XP_004502315.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 104 | 104 | 1.10E-40 | ||
| TIGRFAM | 1 | 101 | 101 | 2.20E-33 | ||
| Pfam | 1 | 100 | 100 | 3.00E-40 | ||
| Gene3D | 1 | 100 | 100 | 1.70E-42 | ||
| CDD | 4 | 100 | 97 | 1.97E-50 | ||
| PANTHER | 7 | 100 | 94 | 0 | – | |
| PANTHER | 7 | 100 | 94 | 0 | – | |
| ProDom | 10 | 100 | 91 | 3.00E-40 | ||
| PANTHER | 131 | 241 | 111 | 0 | – | |
| PANTHER | 131 | 241 | 111 | 0 | – | |
| CDD | 132 | 232 | 101 | 1.20E-51 | ||
| TIGRFAM | 132 | 233 | 102 | 7.80E-39 | ||
| SUPERFAMILY | 132 | 261 | 130 | 2.49E-48 | ||
| Gene3D | 133 | 259 | 127 | 9.30E-48 | ||
| Pfam | 134 | 230 | 97 | 1.80E-38 | ||
| Hamap | 270 | 780 | 511 | 49.121 | ||
| SUPERFAMILY | 271 | 448 | 178 | 5.97E-63 | ||
| CDD | 272 | 780 | 509 | 0 | ||
| TIGRFAM | 272 | 780 | 509 | 1.10E-268 | ||
| Pfam | 272 | 390 | 119 | 5.00E-55 | ||
| PANTHER | 300 | 567 | 268 | 0 | – | |
| PANTHER | 300 | 567 | 268 | 0 | – | |
| Gene3D | 336 | 407 | 72 | 2.90E-12 | ||
| Pfam | 396 | 723 | 328 | 6.20E-77 | ||
| ProSiteProfiles | 400 | 780 | 381 | 202.151 | ||
| SUPERFAMILY | 400 | 703 | 304 | 1.84E-170 | ||
| Gene3D | 408 | 700 | 293 | 1.30E-185 | – | |
| PRINTS | 566 | 583 | 18 | 1.80E-33 | ||
| ProSitePatterns | 588 | 604 | 17 | – | ||
| PANTHER | 591 | 772 | 182 | 0 | – | |
| PANTHER | 591 | 772 | 182 | 0 | – | |
| PRINTS | 605 | 621 | 17 | 1.80E-33 | ||
| PRINTS | 672 | 687 | 16 | 1.80E-33 | ||
| SUPERFAMILY | 680 | 750 | 71 | 1.26E-09 | ||
| PRINTS | 698 | 711 | 14 | 1.80E-33 | ||
| SUPERFAMILY | 752 | 780 | 29 | 1.84E-170 | ||
| Gene3D | 759 | 780 | 22 | 1.30E-185 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. | ||
| Molecular function | Urease activity | Catalysis of the reaction: urea + H2O = CO2 + 2 NH3. | ||
| Molecular function | Nickel cation binding | Interacting selectively and non-covalently with nickel (Ni) cations. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds. | ||
| Biological process | Urea catabolic process | The chemical reactions and pathways resulting in the breakdown of urea, the water soluble compound O=C-(NH2)2. |
Expression pattern of Lj0g3v0308359.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0308359.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.