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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0317569 |
| Transcript ID | Lj0g3v0317569.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloride channel protein CLC-d-like [Glycine max] gi|356497470|ref|XP_003517583.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 6 | 23 | 18 | – | – | |
| Phobius | 24 | 99 | 76 | – | – | |
| PANTHER | 64 | 414 | 351 | 1.60E-198 | – | |
| PANTHER | 64 | 414 | 351 | 1.60E-198 | – | |
| Pfam | 75 | 204 | 130 | 3.10E-30 | ||
| Gene3D | 75 | 228 | 154 | 4.40E-47 | ||
| SUPERFAMILY | 76 | 225 | 150 | 2.22E-35 | ||
| TMHMM | 100 | 119 | 20 | – | – | |
| Phobius | 100 | 118 | 19 | – | – | |
| PRINTS | 119 | 139 | 21 | 4.50E-28 | ||
| Phobius | 119 | 123 | 5 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Phobius | 124 | 146 | 23 | – | – | |
| Phobius | 147 | 157 | 11 | – | – | |
| PRINTS | 154 | 170 | 17 | 4.50E-28 | ||
| Phobius | 158 | 182 | 25 | – | – | |
| TMHMM | 158 | 180 | 23 | – | – | |
| PRINTS | 172 | 191 | 20 | 4.50E-28 | ||
| Phobius | 183 | 187 | 5 | – | – | |
| Phobius | 188 | 206 | 19 | – | – | |
| Phobius | 207 | 422 | 216 | – | – | |
| PRINTS | 210 | 224 | 15 | 4.50E-28 | ||
| SUPERFAMILY | 228 | 402 | 175 | 5.43E-27 | – | |
| Gene3D | 230 | 300 | 71 | 9.30E-19 | – | |
| ProSiteProfiles | 234 | 301 | 68 | 8.713 | ||
| CDD | 244 | 402 | 159 | 4.73E-27 | – | |
| SMART | 244 | 296 | 53 | 0.08 | ||
| Pfam | 245 | 295 | 51 | 0.0013 | ||
| Gene3D | 343 | 402 | 60 | 9.30E-19 | – | |
| ProSiteProfiles | 355 | 411 | 57 | 11.432 | ||
| Pfam | 356 | 402 | 47 | 1.70E-06 | ||
| SMART | 358 | 406 | 49 | 1.40E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Chloride transport | The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0317569.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0317569.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.