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Lj0g3v0325449.1

Overview

Field Value
Gene ID Lj0g3v0325449
Transcript ID Lj0g3v0325449.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3-like [Cicer arietinum] gi|502108258|ref|XP_004493428.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 30 30 – –
PANTHER
PTHR12725:SF60
41 265 225 3.40E-160 –
PANTHER
PTHR12725
41 265 225 3.40E-160 –
PRINTS
PR00413
56 67 12 5.90E-09
IPR006439
Gene3D
G3DSA:3.40.50.1000
57 263 207 1.30E-40
IPR023214
SUPERFAMILY
SSF56784
57 259 203 8.42E-40
IPR023214
TIGRFAM
TIGR02252
57 250 194 3.40E-62
IPR011949
Pfam
PF13419
65 248 184 6.90E-19
IPR023214
TIGRFAM
TIGR01509
146 247 102 2.40E-09
IPR006439
TIGRFAM
TIGR01549
154 245 92 5.90E-14
IPR006439
CDD
cd01427
155 250 96 5.18E-17 –
PRINTS
PR00413
164 177 14 5.90E-09
IPR006439
PRINTS
PR00413
194 210 17 5.90E-09
IPR006439
PRINTS
PR00413
212 232 21 5.90E-09
IPR006439

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj0g3v0325449.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0325449.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.