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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0330459 |
| Transcript ID | Lj0g3v0330459.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable sodium/metabolite cotransporter BASS3, chloroplastic-like [Cicer arietinum] gi|502103317|ref|XP_004492253.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 122 | 122 | – | – | |
| PANTHER | 93 | 428 | 336 | 2.00E-234 | ||
| PANTHER | 93 | 428 | 336 | 2.00E-234 | – | |
| Phobius | 123 | 140 | 18 | – | – | |
| Phobius | 141 | 151 | 11 | – | – | |
| Phobius | 152 | 170 | 19 | – | – | |
| Pfam | 155 | 332 | 178 | 5.50E-31 | ||
| Phobius | 171 | 209 | 39 | – | – | |
| Phobius | 210 | 232 | 23 | – | – | |
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 233 | 237 | 5 | – | – | |
| Phobius | 238 | 267 | 30 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 268 | 278 | 11 | – | – | |
| TMHMM | 272 | 293 | 22 | – | – | |
| Phobius | 279 | 297 | 19 | – | – | |
| Phobius | 298 | 302 | 5 | – | – | |
| TMHMM | 300 | 322 | 23 | – | – | |
| Phobius | 303 | 324 | 22 | – | – | |
| Phobius | 325 | 335 | 11 | – | – | |
| Phobius | 336 | 357 | 22 | – | – | |
| TMHMM | 337 | 359 | 23 | – | – | |
| Phobius | 358 | 397 | 40 | – | – | |
| TMHMM | 372 | 394 | 23 | – | – | |
| Phobius | 398 | 425 | 28 | – | – | |
| TMHMM | 398 | 420 | 23 | – | – | |
| Phobius | 426 | 442 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj0g3v0330459.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0330459.1, powered by CORGI.
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