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Lj0g3v0334059.1

Overview

Field Value
Gene ID Lj0g3v0334059
Transcript ID Lj0g3v0334059.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: nudix hydrolase 19, chloroplastic-like [Glycine max] gi|356514398|ref|XP_003525893.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22769:SF7
39 142 104 1.10E-56 –
PANTHER
PTHR22769
39 142 104 1.10E-56 –
ProSiteProfiles
PS51462
40 153 114 13.703
IPR000086
SUPERFAMILY
SSF55811
43 140 98 1.31E-26
IPR015797
Gene3D
G3DSA:3.90.79.10
44 142 99 8.70E-33
IPR015797
CDD
cd03429
44 142 99 1.58E-51 –
Pfam
PF00293
45 110 66 2.90E-14
IPR000086
PRINTS
PR00502
70 84 15 2.70E-06
IPR020476
ProSitePatterns
PS00893
75 96 22 –
IPR020084
PRINTS
PR00502
84 99 16 2.70E-06
IPR020476

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 44

Expression data

Expression pattern

Expression pattern of Lj0g3v0334059.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0334059.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.