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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0335989 |
| Transcript ID | Lj0g3v0335989.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Subtilisin-like protease [Medicago truncatula] gi|357507043|ref|XP_003623810.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 29 | 29 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| PANTHER | 10 | 507 | 498 | 7.60E-280 | ||
| PANTHER | 10 | 507 | 498 | 7.60E-280 | – | |
| Phobius | 16 | 24 | 9 | – | – | |
| Phobius | 25 | 29 | 5 | – | – | |
| Phobius | 30 | 507 | 478 | – | – | |
| Pfam | 35 | 127 | 93 | 8.30E-08 | ||
| CDD | 124 | 355 | 232 | 2.79E-117 | – | |
| SUPERFAMILY | 126 | 391 | 266 | 6.55E-45 | ||
| Gene3D | 141 | 367 | 227 | 2.00E-42 | ||
| PRINTS | 150 | 169 | 20 | 2.50E-05 | ||
| Pfam | 151 | 390 | 240 | 1.40E-27 | ||
| ProSitePatterns | 155 | 166 | 12 | – | ||
| MobiDBLite | 219 | 238 | 20 | – | – | |
| PRINTS | 228 | 241 | 14 | 2.50E-05 | ||
| CDD | 365 | 489 | 125 | 1.37E-39 | – | |
| Gene3D | 382 | 487 | 106 | 4.10E-07 | – | |
| Pfam | 387 | 474 | 88 | 3.00E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj0g3v0335989.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0335989.1, powered by CORGI.
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