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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0114210 |
| Transcript ID | Lj1g3v0114210.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At3g22670, mitochondrial-like [Cicer arietinum] gi|502159071|ref|XP_004511384.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 542 | 527 | 1.10E-289 | – | |
| PANTHER | 16 | 542 | 527 | 1.10E-289 | – | |
| ProSiteProfiles | 166 | 196 | 31 | 8.638 | ||
| TIGRFAM | 169 | 198 | 30 | 1.70E-04 | ||
| Pfam | 170 | 195 | 26 | 0.0049 | ||
| SUPERFAMILY | 179 | 398 | 220 | 2.33E-05 | – | |
| ProSiteProfiles | 201 | 235 | 35 | 9.339 | ||
| TIGRFAM | 204 | 236 | 33 | 1.60E-04 | ||
| Pfam | 204 | 233 | 30 | 0.01 | ||
| Gene3D | 214 | 400 | 187 | 1.10E-06 | ||
| ProSiteProfiles | 236 | 266 | 31 | 6.27 | ||
| ProSiteProfiles | 270 | 304 | 35 | 12.715 | ||
| Pfam | 273 | 302 | 30 | 1.80E-05 | ||
| TIGRFAM | 273 | 306 | 34 | 1.00E-09 | ||
| Pfam | 304 | 351 | 48 | 1.20E-14 | ||
| ProSiteProfiles | 305 | 339 | 35 | 12.693 | ||
| TIGRFAM | 307 | 341 | 35 | 6.90E-10 | ||
| ProSiteProfiles | 340 | 374 | 35 | 12.803 | ||
| TIGRFAM | 342 | 376 | 35 | 1.10E-09 | ||
| Pfam | 371 | 402 | 32 | 9.90E-07 | ||
| ProSiteProfiles | 375 | 409 | 35 | 10.38 | ||
| TIGRFAM | 379 | 411 | 33 | 1.60E-06 | ||
| Pfam | 410 | 458 | 49 | 1.30E-13 | ||
| ProSiteProfiles | 410 | 444 | 35 | 12.277 | ||
| TIGRFAM | 412 | 445 | 34 | 8.80E-09 | ||
| ProSiteProfiles | 445 | 479 | 35 | 9.284 | ||
| ProSiteProfiles | 480 | 514 | 35 | 11.356 | ||
| TIGRFAM | 483 | 514 | 32 | 1.10E-04 | ||
| Pfam | 483 | 512 | 30 | 6.70E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v0114210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0114210.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.