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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0131180 |
| Transcript ID | Lj1g3v0131180.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g06710, mitochondrial-like [Cicer arietinum] gi|502159156|ref|XP_004511412.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 62 | 96 | 35 | 8.1 | ||
| ProSiteProfiles | 97 | 131 | 35 | 9.427 | ||
| TIGRFAM | 100 | 132 | 33 | 1.40E-04 | ||
| Pfam | 100 | 129 | 30 | 0.012 | ||
| ProSiteProfiles | 132 | 162 | 31 | 5.667 | ||
| PANTHER | 143 | 278 | 136 | 0 | – | |
| PANTHER | 143 | 278 | 136 | 0 | – | |
| Pfam | 163 | 211 | 49 | 1.30E-13 | ||
| ProSiteProfiles | 164 | 198 | 35 | 11.455 | ||
| TIGRFAM | 168 | 200 | 33 | 1.70E-07 | ||
| ProSiteProfiles | 199 | 233 | 35 | 10.786 | ||
| TIGRFAM | 201 | 234 | 34 | 2.30E-05 | ||
| ProSiteProfiles | 234 | 268 | 35 | 12.332 | ||
| TIGRFAM | 237 | 268 | 32 | 4.50E-08 | ||
| Pfam | 237 | 281 | 45 | 8.80E-10 | ||
| Gene3D | 242 | 264 | 23 | 4.10E-05 | ||
| SUPERFAMILY | 243 | 342 | 100 | 9.94E-05 | – | |
| ProSiteProfiles | 269 | 309 | 41 | 5.448 | ||
| ProSiteProfiles | 310 | 344 | 35 | 9.843 | ||
| Gene3D | 317 | 340 | 24 | 4.10E-05 | ||
| TIGRFAM | 319 | 345 | 27 | 1.80E-06 | ||
| Pfam | 319 | 342 | 24 | 0.0088 | ||
| PANTHER | 320 | 470 | 151 | 0 | – | |
| PANTHER | 320 | 470 | 151 | 0 | – | |
| ProSiteProfiles | 345 | 379 | 35 | 11.729 | ||
| TIGRFAM | 348 | 381 | 34 | 5.20E-08 | ||
| Pfam | 352 | 393 | 42 | 1.20E-14 | ||
| SUPERFAMILY | 378 | 476 | 99 | 9.94E-05 | – | |
| ProSiteProfiles | 380 | 414 | 35 | 13.285 | ||
| Gene3D | 381 | 422 | 42 | 2.30E-08 | ||
| TIGRFAM | 382 | 416 | 35 | 6.10E-11 | ||
| Pfam | 414 | 463 | 50 | 1.60E-17 | ||
| ProSiteProfiles | 415 | 449 | 35 | 12.167 | ||
| TIGRFAM | 417 | 451 | 35 | 1.10E-08 | ||
| Gene3D | 423 | 477 | 55 | 4.10E-05 | ||
| ProSiteProfiles | 450 | 480 | 31 | 10.95 | ||
| TIGRFAM | 452 | 478 | 27 | 3.60E-08 | ||
| Pfam | 500 | 528 | 29 | 7.20E-11 | ||
| PANTHER | 500 | 722 | 223 | 0 | – | |
| PANTHER | 500 | 722 | 223 | 0 | – | |
| ProSiteProfiles | 501 | 535 | 35 | 13.033 | ||
| TIGRFAM | 503 | 536 | 34 | 4.80E-09 | ||
| Pfam | 535 | 584 | 50 | 5.90E-15 | ||
| ProSiteProfiles | 536 | 570 | 35 | 12.967 | ||
| TIGRFAM | 539 | 571 | 33 | 7.40E-07 | ||
| Gene3D | 539 | 636 | 98 | 2.30E-08 | ||
| ProSiteProfiles | 571 | 605 | 35 | 10.994 | ||
| TIGRFAM | 573 | 607 | 35 | 9.70E-08 | ||
| Pfam | 605 | 653 | 49 | 1.40E-18 | ||
| ProSiteProfiles | 606 | 640 | 35 | 13.176 | ||
| TIGRFAM | 608 | 642 | 35 | 4.30E-09 | ||
| ProSiteProfiles | 641 | 675 | 35 | 12.858 | ||
| TIGRFAM | 643 | 676 | 34 | 1.80E-10 | ||
| Pfam | 672 | 704 | 33 | 1.40E-10 | ||
| ProSiteProfiles | 676 | 706 | 31 | 9.712 | ||
| ProSiteProfiles | 744 | 778 | 35 | 7.037 | ||
| Pfam | 748 | 772 | 25 | 0.38 | ||
| PANTHER | 754 | 772 | 19 | 0 | – | |
| PANTHER | 754 | 772 | 19 | 0 | – | |
| ProSiteProfiles | 781 | 815 | 35 | 10.446 | ||
| TIGRFAM | 783 | 815 | 33 | 2.50E-05 | ||
| Pfam | 784 | 813 | 30 | 0.0071 | ||
| PANTHER | 812 | 857 | 46 | 0 | – | |
| PANTHER | 812 | 857 | 46 | 0 | – | |
| ProSiteProfiles | 816 | 850 | 35 | 6.675 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v0131180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0131180.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.