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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0437880 |
| Transcript ID | Lj1g3v0437880.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable transporter MCH1-like [Cicer arietinum] gi|502098650|ref|XP_004491285.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 360 | 360 | 5.30E-191 | – | |
| PANTHER | 1 | 360 | 360 | 5.30E-191 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Pfam | 2 | 85 | 84 | 9.20E-07 | ||
| TMHMM | 4 | 22 | 19 | – | – | |
| Phobius | 6 | 23 | 18 | – | – | |
| Phobius | 24 | 34 | 11 | – | – | |
| TMHMM | 35 | 54 | 20 | – | – | |
| Phobius | 35 | 56 | 22 | – | – | |
| SUPERFAMILY | 38 | 351 | 314 | 5.23E-23 | ||
| Phobius | 57 | 61 | 5 | – | – | |
| Phobius | 62 | 86 | 25 | – | – | |
| TMHMM | 64 | 86 | 23 | – | – | |
| Phobius | 87 | 153 | 67 | – | – | |
| Gene3D | 152 | 349 | 198 | 3.90E-12 | – | |
| Phobius | 154 | 174 | 21 | – | – | |
| ProSiteProfiles | 154 | 365 | 212 | 8.528 | ||
| CDD | 156 | 346 | 191 | 3.29E-06 | ||
| TMHMM | 156 | 178 | 23 | – | – | |
| Pfam | 159 | 349 | 191 | 1.10E-09 | ||
| Phobius | 175 | 193 | 19 | – | – | |
| Phobius | 194 | 213 | 20 | – | – | |
| Phobius | 214 | 224 | 11 | – | – | |
| TMHMM | 221 | 243 | 23 | – | – | |
| Phobius | 225 | 243 | 19 | – | – | |
| Phobius | 244 | 248 | 5 | – | – | |
| Phobius | 249 | 271 | 23 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| Phobius | 272 | 282 | 11 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 283 | 304 | 22 | – | – | |
| Phobius | 305 | 323 | 19 | – | – | |
| Phobius | 324 | 347 | 24 | – | – | |
| TMHMM | 325 | 347 | 23 | – | – | |
| Phobius | 348 | 365 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v0437880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0437880.1, powered by CORGI.
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