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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0437880 |
| Transcript ID | Lj1g3v0437880.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable transporter MCH1-like [Cicer arietinum] gi|502098650|ref|XP_004491285.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 10 | 538 | 529 | 4.50E-304 | – | |
| PANTHER | 10 | 538 | 529 | 4.50E-304 | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| Pfam | 13 | 263 | 251 | 1.80E-60 | ||
| TMHMM | 13 | 35 | 23 | – | – | |
| Gene3D | 14 | 177 | 164 | 2.50E-04 | – | |
| SUPERFAMILY | 14 | 204 | 191 | 3.27E-08 | ||
| Phobius | 34 | 52 | 19 | – | – | |
| TMHMM | 50 | 72 | 23 | – | – | |
| Phobius | 53 | 75 | 23 | – | – | |
| Phobius | 76 | 86 | 11 | – | – | |
| TMHMM | 85 | 107 | 23 | – | – | |
| Phobius | 87 | 107 | 21 | – | – | |
| Phobius | 108 | 112 | 5 | – | – | |
| TMHMM | 112 | 131 | 20 | – | – | |
| Phobius | 113 | 132 | 20 | – | – | |
| Phobius | 133 | 143 | 11 | – | – | |
| TMHMM | 144 | 166 | 23 | – | – | |
| Phobius | 144 | 169 | 26 | – | – | |
| Phobius | 170 | 180 | 11 | – | – | |
| TMHMM | 181 | 200 | 20 | – | – | |
| Phobius | 181 | 201 | 21 | – | – | |
| Phobius | 202 | 212 | 11 | – | – | |
| Phobius | 213 | 234 | 22 | – | – | |
| TMHMM | 213 | 232 | 20 | – | – | |
| SUPERFAMILY | 217 | 281 | 65 | 1.44E-22 | ||
| Phobius | 235 | 239 | 5 | – | – | |
| Phobius | 240 | 264 | 25 | – | – | |
| TMHMM | 242 | 264 | 23 | – | – | |
| Phobius | 265 | 331 | 67 | – | – | |
| SUPERFAMILY | 316 | 531 | 216 | 1.44E-22 | ||
| ProSiteProfiles | 332 | 543 | 212 | 8.528 | ||
| Phobius | 332 | 352 | 21 | – | – | |
| Gene3D | 333 | 526 | 194 | 1.10E-11 | – | |
| CDD | 334 | 524 | 191 | 4.31E-06 | ||
| TMHMM | 334 | 356 | 23 | – | – | |
| Pfam | 337 | 527 | 191 | 1.40E-10 | ||
| Phobius | 353 | 371 | 19 | – | – | |
| Phobius | 372 | 391 | 20 | – | – | |
| Phobius | 392 | 402 | 11 | – | – | |
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 403 | 421 | 19 | – | – | |
| Phobius | 422 | 426 | 5 | – | – | |
| Phobius | 427 | 449 | 23 | – | – | |
| TMHMM | 428 | 450 | 23 | – | – | |
| Phobius | 450 | 460 | 11 | – | – | |
| TMHMM | 460 | 482 | 23 | – | – | |
| Phobius | 461 | 482 | 22 | – | – | |
| Phobius | 483 | 501 | 19 | – | – | |
| Phobius | 502 | 525 | 24 | – | – | |
| TMHMM | 503 | 525 | 23 | – | – | |
| Phobius | 526 | 543 | 18 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v0437880.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0437880.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.