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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0438930 |
| Transcript ID | Lj1g3v0438930.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nodulin-like protein [Medicago truncatula] gi|357454707|ref|XP_003597634.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 66 | 66 | 0 | – | |
| PANTHER | 1 | 66 | 66 | 0 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| SUPERFAMILY | 5 | 204 | 200 | 3.27E-08 | ||
| Pfam | 7 | 266 | 260 | 1.00E-58 | ||
| Phobius | 12 | 34 | 23 | – | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 35 | 53 | 19 | – | – | |
| TMHMM | 54 | 73 | 20 | – | – | |
| Phobius | 54 | 73 | 20 | – | – | |
| Phobius | 74 | 84 | 11 | – | – | |
| PANTHER | 83 | 530 | 448 | 0 | – | |
| PANTHER | 83 | 530 | 448 | 0 | – | |
| Phobius | 85 | 112 | 28 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 113 | 117 | 5 | – | – | |
| Phobius | 118 | 138 | 21 | – | – | |
| TMHMM | 123 | 145 | 23 | – | – | |
| Phobius | 139 | 149 | 11 | – | – | |
| Phobius | 150 | 172 | 23 | – | – | |
| TMHMM | 152 | 174 | 23 | – | – | |
| Phobius | 173 | 183 | 11 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 184 | 205 | 22 | – | – | |
| Phobius | 206 | 216 | 11 | – | – | |
| Phobius | 217 | 240 | 24 | – | – | |
| TMHMM | 219 | 241 | 23 | – | – | |
| SUPERFAMILY | 225 | 515 | 291 | 1.83E-20 | ||
| Phobius | 241 | 245 | 5 | – | – | |
| TMHMM | 245 | 267 | 23 | – | – | |
| Phobius | 246 | 267 | 22 | – | – | |
| Phobius | 268 | 309 | 42 | – | – | |
| Phobius | 310 | 335 | 26 | – | – | |
| ProSiteProfiles | 317 | 530 | 214 | 9.825 | ||
| CDD | 319 | 511 | 193 | 1.35E-04 | ||
| Gene3D | 319 | 513 | 195 | 2.10E-11 | – | |
| Pfam | 322 | 515 | 194 | 1.30E-10 | ||
| Phobius | 336 | 346 | 11 | – | – | |
| Phobius | 347 | 367 | 21 | – | – | |
| Phobius | 368 | 387 | 20 | – | – | |
| Phobius | 388 | 409 | 22 | – | – | |
| TMHMM | 389 | 408 | 20 | – | – | |
| Phobius | 410 | 414 | 5 | – | – | |
| Phobius | 415 | 435 | 21 | – | – | |
| TMHMM | 418 | 440 | 23 | – | – | |
| Phobius | 436 | 446 | 11 | – | – | |
| TMHMM | 447 | 469 | 23 | – | – | |
| Phobius | 447 | 471 | 25 | – | – | |
| Phobius | 472 | 482 | 11 | – | – | |
| Phobius | 483 | 511 | 29 | – | – | |
| TMHMM | 489 | 511 | 23 | – | – | |
| Phobius | 512 | 530 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v0438930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0438930.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.