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Lj1g3v0627680.3

Overview

Field Value
Gene ID Lj1g3v0627680
Transcript ID Lj1g3v0627680.3
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD 2 134 133 6.09E-17
PANTHER 3 754 752 0
PANTHER 3 754 752 0
Coils 31 51 21
Coils 115 135 21
SUPERFAMILY 147 421 275 2.04E-65
Gene3D 166 340 175 6.70E-16
Pfam 169 448 280 2.00E-61
PRINTS 190 205 16 2.20E-18
PRINTS 263 277 15 2.20E-18
PRINTS 359 373 15 2.20E-18
SUPERFAMILY 485 674 190 1.53E-27
Gene3D 515 718 204 5.50E-12
PRINTS 623 639 17 2.20E-18
SUPERFAMILY 702 865 164 1.53E-27
Gene3D 758 793 36 2.70E-18
SUPERFAMILY 830 1067 238 1.57E-28
Gene3D 851 959 109 2.70E-18
Gene3D 960 1067 108 2.20E-11
PANTHER 1001 1050 50 0
PANTHER 1001 1050 50 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

Expression data

Expression pattern

Expression pattern of Lj1g3v0627680.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0627680.3, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.