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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0987670 |
| Transcript ID | Lj1g3v0987670.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptide transporter PTR1-like isoform X1 [Cicer arietinum] gi|502104019|ref|XP_004492413.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 56 | 56 | – | – | |
| PANTHER | 2 | 168 | 167 | 2.40E-106 | ||
| PANTHER | 2 | 168 | 167 | 2.40E-106 | – | |
| Pfam | 8 | 150 | 143 | 1.20E-53 | ||
| Gene3D | 13 | 105 | 93 | 1.20E-08 | – | |
| SUPERFAMILY | 15 | 107 | 93 | 7.06E-12 | ||
| CDD | 23 | 105 | 83 | 1.46E-06 | ||
| TMHMM | 57 | 79 | 23 | – | – | |
| Phobius | 57 | 79 | 23 | – | – | |
| ProSitePatterns | 58 | 70 | 13 | – | ||
| Phobius | 80 | 84 | 5 | – | – | |
| TMHMM | 83 | 105 | 23 | – | – | |
| Phobius | 85 | 105 | 21 | – | – | |
| Phobius | 106 | 177 | 72 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v0987670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0987670.1, powered by CORGI.
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