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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1341640 |
| Transcript ID | Lj1g3v1341640.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 88 | 88 | 0 | – | |
| PANTHER | 1 | 88 | 88 | 0 | – | |
| ProSiteProfiles | 18 | 52 | 35 | 5.864 | ||
| ProSiteProfiles | 53 | 83 | 31 | 8.44 | ||
| Pfam | 58 | 84 | 27 | 2.10E-04 | ||
| TIGRFAM | 58 | 83 | 26 | 6.40E-04 | ||
| Gene3D | 60 | 116 | 57 | 4.30E-12 | ||
| ProSiteProfiles | 84 | 114 | 31 | 9.624 | ||
| Pfam | 86 | 112 | 27 | 1.20E-05 | ||
| TIGRFAM | 86 | 109 | 24 | 7.60E-04 | ||
| Pfam | 114 | 162 | 49 | 2.30E-08 | ||
| ProSiteProfiles | 115 | 149 | 35 | 10.907 | ||
| TIGRFAM | 118 | 150 | 33 | 1.00E-06 | ||
| PANTHER | 120 | 634 | 515 | 0 | – | |
| PANTHER | 120 | 634 | 515 | 0 | – | |
| ProSiteProfiles | 185 | 215 | 31 | 6.095 | ||
| Pfam | 216 | 263 | 48 | 7.30E-09 | ||
| ProSiteProfiles | 216 | 250 | 35 | 12.09 | ||
| TIGRFAM | 218 | 252 | 35 | 3.90E-07 | ||
| ProSiteProfiles | 251 | 286 | 36 | 6.007 | ||
| ProSiteProfiles | 287 | 321 | 35 | 8.813 | ||
| Pfam | 292 | 315 | 24 | 0.025 | ||
| ProSiteProfiles | 323 | 348 | 26 | 5.152 | ||
| TIGRFAM | 323 | 351 | 29 | 0.0016 | ||
| Gene3D | 348 | 487 | 140 | 4.30E-12 | ||
| ProSiteProfiles | 349 | 383 | 35 | 10.808 | ||
| Pfam | 349 | 396 | 48 | 2.90E-10 | ||
| ProSiteProfiles | 384 | 418 | 35 | 5.097 | ||
| ProSiteProfiles | 425 | 455 | 31 | 8.901 | ||
| TIGRFAM | 430 | 456 | 27 | 4.00E-04 | ||
| Pfam | 430 | 455 | 26 | 4.50E-04 | ||
| ProSiteProfiles | 456 | 490 | 35 | 11.981 | ||
| TIGRFAM | 458 | 491 | 34 | 1.80E-07 | ||
| Pfam | 458 | 487 | 30 | 8.10E-09 | ||
| ProSiteProfiles | 491 | 526 | 36 | 7.3 | ||
| ProSiteProfiles | 527 | 557 | 31 | 6.314 | ||
| Pfam | 530 | 555 | 26 | 0.022 | ||
| Gene3D | 557 | 614 | 58 | 4.30E-12 | ||
| ProSiteProfiles | 559 | 589 | 31 | 5.185 | ||
| SUPERFAMILY | 566 | 612 | 47 | 7.32E-05 | ||
| ProSiteProfiles | 593 | 627 | 35 | 7.465 | ||
| Pfam | 629 | 698 | 70 | 2.60E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj1g3v1341640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1341640.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.