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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1442930 |
| Transcript ID | Lj1g3v1442930.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD1-like [Cicer arietinum] gi|502133396|ref|XP_004501749.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 94 | 94 | 2.40E-248 | – | |
| PANTHER | 1 | 94 | 94 | 2.40E-248 | – | |
| Gene3D | 48 | 193 | 146 | 1.00E-23 | ||
| SUPERFAMILY | 54 | 195 | 142 | 1.79E-23 | ||
| ProSiteProfiles | 54 | 191 | 138 | 17.229 | ||
| SMART | 55 | 193 | 139 | 2.60E-21 | ||
| Pfam | 56 | 190 | 135 | 1.80E-13 | ||
| CDD | 57 | 195 | 139 | 6.16E-37 | – | |
| PANTHER | 137 | 194 | 58 | 2.40E-248 | – | |
| PANTHER | 137 | 194 | 58 | 2.40E-248 | – | |
| MobiDBLite | 228 | 249 | 22 | – | – | |
| PANTHER | 251 | 347 | 97 | 2.40E-248 | – | |
| PANTHER | 251 | 347 | 97 | 2.40E-248 | – | |
| SMART | 255 | 400 | 146 | 7.70E-40 | ||
| SUPERFAMILY | 255 | 395 | 141 | 6.41E-37 | – | |
| ProSiteProfiles | 255 | 400 | 146 | 27.166 | ||
| Pfam | 258 | 393 | 136 | 2.80E-32 | ||
| PRINTS | 267 | 286 | 20 | 1.80E-15 | ||
| PRINTS | 286 | 303 | 18 | 1.80E-15 | ||
| PRINTS | 309 | 330 | 22 | 1.80E-15 | ||
| PANTHER | 367 | 440 | 74 | 2.40E-248 | – | |
| PANTHER | 367 | 440 | 74 | 2.40E-248 | – | |
| Gene3D | 414 | 437 | 24 | 2.20E-24 | ||
| SUPERFAMILY | 424 | 435 | 12 | 9.79E-23 | ||
| PANTHER | 469 | 560 | 92 | 2.40E-248 | – | |
| SUPERFAMILY | 469 | 558 | 90 | 9.79E-23 | ||
| PANTHER | 469 | 560 | 92 | 2.40E-248 | – | |
| ProSiteProfiles | 471 | 503 | 33 | 12.129 | ||
| SMART | 471 | 500 | 30 | 0.032 | ||
| ProSiteProfiles | 471 | 564 | 94 | 26.708 | ||
| Gene3D | 471 | 561 | 91 | 2.20E-24 | ||
| CDD | 476 | 545 | 70 | 7.69E-22 | – | |
| Pfam | 476 | 559 | 84 | 2.30E-11 | ||
| SMART | 504 | 533 | 30 | 6.40E-05 | ||
| ProSiteProfiles | 504 | 536 | 33 | 11.808 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1442930.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1442930.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.