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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1785880 |
| Transcript ID | Lj1g3v1785880.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NADH-ubiquinone oxidoreductase subunit-like protein [Medicago truncatula] gi|357465715|ref|XP_003603142.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 143 | 143 | 4.50E-131 | – | |
| PANTHER | 1 | 143 | 143 | 4.50E-131 | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| SUPERFAMILY | 1 | 136 | 136 | 2.09E-65 | – | |
| SignalP | 1 | 19 | 19 | – | – | |
| TIGRFAM | 1 | 133 | 133 | 1.30E-74 | ||
| ProSiteProfiles | 1 | 18 | 18 | 5 | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| Hamap | 1 | 132 | 132 | 38.81 | ||
| Gene3D | 2 | 131 | 130 | 5.50E-33 | ||
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 13 | 21 | 9 | – | – | |
| Pfam | 18 | 127 | 110 | 5.60E-23 | ||
| Phobius | 22 | 30 | 9 | – | – | |
| Phobius | 31 | 143 | 113 | – | – | |
| ProSitePatterns | 99 | 115 | 17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NADH dehydrogenase (ubiquinone) activity | Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol. | ||
| Molecular function | Quinone binding | Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Molecular function | 4 iron, 4 sulfur cluster binding | Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v1785880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1785880.1, powered by CORGI.
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