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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1798860 |
| Transcript ID | Lj1g3v1798860.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ankyrin repeat domain-containing protein [Medicago truncatula] gi|357465949|ref|XP_003603259.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 289 | 289 | – | – | |
| ProSiteProfiles | 1 | 222 | 222 | 26.841 | ||
| PANTHER | 1 | 319 | 319 | 3.70E-172 | – | |
| PANTHER | 1 | 319 | 319 | 3.70E-172 | – | |
| SUPERFAMILY | 4 | 229 | 226 | 5.39E-32 | ||
| Gene3D | 4 | 229 | 226 | 4.60E-32 | ||
| Pfam | 7 | 94 | 88 | 2.70E-06 | ||
| SMART | 36 | 65 | 30 | 31 | ||
| CDD | 68 | 205 | 138 | 1.06E-18 | – | |
| SMART | 70 | 99 | 30 | 4.4 | ||
| ProSiteProfiles | 104 | 125 | 22 | 8.763 | ||
| Pfam | 104 | 159 | 56 | 4.10E-07 | ||
| SMART | 104 | 134 | 31 | 5.8 | ||
| SMART | 138 | 168 | 31 | 1400 | ||
| Pfam | 176 | 224 | 49 | 3.30E-08 | – | |
| SMART | 184 | 213 | 30 | 0.054 | ||
| ProSiteProfiles | 184 | 216 | 33 | 10.045 | ||
| Pfam | 285 | 381 | 97 | 8.80E-14 | ||
| TMHMM | 290 | 307 | 18 | – | – | |
| Phobius | 290 | 307 | 18 | – | – | |
| Phobius | 308 | 354 | 47 | – | – | |
| PANTHER | 341 | 457 | 117 | 3.70E-172 | – | |
| PANTHER | 341 | 457 | 117 | 3.70E-172 | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| Phobius | 355 | 376 | 22 | – | – | |
| Phobius | 377 | 382 | 6 | – | – | |
| TMHMM | 381 | 403 | 23 | – | – | |
| Phobius | 383 | 404 | 22 | – | – | |
| Phobius | 405 | 409 | 5 | – | – | |
| Phobius | 410 | 432 | 23 | – | – | |
| TMHMM | 413 | 435 | 23 | – | – | |
| Phobius | 433 | 457 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1798860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1798860.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.