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Lj1g3v2295280.1

Overview

Field Value
Gene ID Lj1g3v2295280
Transcript ID Lj1g3v2295280.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase PBS1-like [Cicer arietinum] gi|502131081|ref|XP_004500868.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
1 14 14 3.40E-220 –
PANTHER
PTHR27001:SF3
1 14 14 3.40E-220 –
MobiDBLite
mobidb-lite
19 68 50 – –
PANTHER
PTHR27001:SF3
45 385 341 3.40E-220 –
PANTHER
PTHR27001
45 385 341 3.40E-220 –
Gene3D
G3DSA:2.60.120.200
59 98 40 3.80E-08
IPR013320
SUPERFAMILY
SSF56112
65 359 295 1.30E-84
IPR011009
ProSiteProfiles
PS50011
85 361 277 38.831
IPR000719
SMART
SM00220
85 361 277 6.10E-41
IPR000719
Pfam
PF00069
86 355 270 4.70E-47
IPR000719
ProSitePatterns
PS00107
91 113 23 –
IPR017441
CDD
cd14066
91 359 269 3.99E-100 –
Gene3D
G3DSA:3.30.200.20
99 149 51 8.50E-29 –
Gene3D
G3DSA:1.10.510.10
150 355 206 1.80E-43 –
ProSitePatterns
PS00108
207 219 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj1g3v2295280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2295280.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.