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Lj1g3v2300730.1

Overview

Field Value
Gene ID Lj1g3v2300730
Transcript ID Lj1g3v2300730.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor DIVARICATA-like [Cicer arietinum] gi|502104025|ref|XP_004492415.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51293
24 78 55 8.223
IPR017884
SMART
SM00717
25 77 53 3.70E-07
IPR001005
Pfam
PF00249
28 73 46 1.10E-05
IPR001005
CDD
cd00167
28 74 47 3.26E-05 –
SUPERFAMILY
SSF46689
28 82 55 1.48E-11
IPR009057
PANTHER
PTHR24078:SF261
29 162 134 1.00E-39 –
PANTHER
PTHR24078
29 162 134 1.00E-39 –
Gene3D
G3DSA:1.10.10.60
131 162 32 1.40E-06
IPR009057
ProSiteProfiles
PS51294
133 164 32 11.258
IPR017930
SUPERFAMILY
SSF46689
134 162 29 5.46E-06
IPR009057
CDD
cd00167
140 163 24 2.67E-05 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj1g3v2300730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2300730.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.