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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2372280 |
| Transcript ID | Lj1g3v2372280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: importin-11-like [Glycine max] gi|356568126|ref|XP_003552264.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 356 | 356 | 8.13E-83 | ||
| PANTHER | 2 | 357 | 356 | 5.00E-296 | – | |
| PANTHER | 2 | 357 | 356 | 5.00E-296 | – | |
| Gene3D | 6 | 365 | 360 | 4.80E-98 | ||
| ProSiteProfiles | 29 | 104 | 76 | 17.243 | ||
| Pfam | 29 | 102 | 74 | 3.80E-16 | ||
| SMART | 29 | 104 | 76 | 2.40E-11 | ||
| PANTHER | 384 | 988 | 605 | 5.00E-296 | – | |
| PANTHER | 384 | 988 | 605 | 5.00E-296 | – | |
| SUPERFAMILY | 389 | 1005 | 617 | 8.13E-83 | ||
| Gene3D | 397 | 930 | 534 | 4.80E-98 | ||
| MobiDBLite | 927 | 951 | 25 | – | – | |
| Gene3D | 968 | 1006 | 39 | 4.80E-98 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Molecular function | Ran GTPase binding | Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly. |
Expression pattern of Lj1g3v2372280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2372280.1, powered by CORGI.
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