Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001494
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 52 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.820s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0313719.2
n.a. PREDICTED: probable importin-7 homolog isoform X1 [Cicer arietinum] gi|502102327|ref|XP_004492039.1| chr0 163772308 163775152 -
3 domain predictions
2 GO terms
Lj0g3v0358599.1
n.a. PREDICTED: transportin-3-like isoform 2 [Glycine max] gi|356562789|ref|XP_003549651.1| chr0 188783180 188791285 -
2 domain predictions
2 GO terms
Lj1g3v0998740.1
n.a. PREDICTED: importin subunit beta-1-like [Cicer arietinum] gi|502136423|ref|XP_004502681.1| chr1 12668543 12673082 +
4 domain predictions
2 GO terms
Lj1g3v2372280.1
n.a. PREDICTED: importin-11-like [Glycine max] gi|356568126|ref|XP_003552264.1| chr1 27773600 27811071 -
4 domain predictions
2 GO terms
Lj1g3v2811580.1
n.a. PREDICTED: importin-11-like [Glycine max] gi|356568126|ref|XP_003552264.1| chr1 32095221 32095583 +
3 domain predictions
2 GO terms
Lj3g3v2455430.1
n.a. PREDICTED: exportin-2-like isoform 1 [Glycine max] gi|356560135|ref|XP_003548351.1| chr3 30329282 30334633 +
4 domain predictions
2 GO terms
Lj3g3v3627880.1
n.a. PREDICTED: exportin-1-like isoform 1 [Glycine max] gi|356538463|ref|XP_003537723.1| chr3 43757984 43770143 -
4 domain predictions
2 GO terms
Lj3g3v3628910.1
n.a. PREDICTED: exportin-1-like isoform 1 [Glycine max] gi|356538463|ref|XP_003537723.1| chr3 43789065 43800927 -
4 domain predictions
2 GO terms
Lj4g3v2250230.1
n.a. ARM repeat superfamily protein [Theobroma cacao] gi|508714972|gb|EOY06869.1| chr4 31094018 31103379 +
4 domain predictions
2 GO terms
Lj4g3v2604270.1
n.a. PREDICTED: importin-5-like isoform X2 [Cicer arietinum] gi|502140730|ref|XP_004504314.1| chr4 35157273 35165829 +
2 domain predictions
2 GO terms
Lj4g3v3014470.1
n.a. PREDICTED: importin subunit beta-1-like [Glycine max] gi|356523655|ref|XP_003530452.1| chr4 40084753 40089070 -
4 domain predictions
2 GO terms
Lj5g3v2246110.1
n.a. PREDICTED: transportin-1-like isoform 1 [Glycine max] gi|356536398|ref|XP_003536725.1| chr5 32594587 32609496 +
4 domain predictions
2 GO terms
Lj6g3v2274460.1
n.a. PREDICTED: probable importin subunit beta-4-like [Glycine max] gi|356558485|ref|XP_003547537.1| chr6 26460405 26467503 -
4 domain predictions
2 GO terms
LotjaGi1g1v0289100.1
n.a. Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|V7ASE2|V7ASE2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0289100 LjG1.1_chr1 70068821 70073351 -
4 domain predictions
2 GO terms
LotjaGi1g1v0289100.2
n.a. Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|V7ASE2|V7ASE2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0289100 LjG1.1_chr1 70069905 70072608 -
4 domain predictions
2 GO terms
LotjaGi1g1v0443600.1
n.a. Importin-like protein; TAIR: AT3G08960.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9UI26|IPO11_HUMAN Importin-11; TrEMBL-Plants: tr|K7MTL7|K7MTL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0443600 LjG1.1_chr1 94104405 94142733 -
4 domain predictions
2 GO terms
LotjaGi1g1v0443600.2
n.a. Importin-like protein; TAIR: AT3G08960.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9UI26|IPO11_HUMAN Importin-11; TrEMBL-Plants: tr|K7MTL7|K7MTL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0443600 LjG1.1_chr1 94106384 94142358 -
4 domain predictions
2 GO terms
LotjaGi1g1v0443600.3
n.a. Importin-like protein; TAIR: AT3G08960.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9UI26|IPO11_HUMAN Importin-11; TrEMBL-Plants: tr|K7MTL7|K7MTL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0443600 LjG1.1_chr1 94106397 94142358 -
4 domain predictions
2 GO terms
LotjaGi1g1v0443600.4
n.a. Importin-like protein; TAIR: AT3G08960.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9UI26|IPO11_HUMAN Importin-11; TrEMBL-Plants: tr|K7MTL7|K7MTL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0443600 LjG1.1_chr1 94106397 94142358 -
4 domain predictions
2 GO terms
LotjaGi1g1v0529600.1
n.a. Importin-like protein; TAIR: AT2G31660.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4IRR2|SAD2_ARATH Importin beta-like SAD2; TrEMBL-Plants: tr|I1N4Z0|I1N4Z0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0529600 LjG1.1_chr1 105661307 105680163 +
4 domain predictions
2 GO terms
LotjaGi1g1v0529600.3
n.a. Importin-like protein; TAIR: AT2G31660.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4IRR2|SAD2_ARATH Importin beta-like SAD2; TrEMBL-Plants: tr|I1N4Z0|I1N4Z0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0529600 LjG1.1_chr1 105661663 105679091 +
4 domain predictions
2 GO terms
LotjaGi1g1v0547000.1
n.a. Importin-like protein; TAIR: AT2G31660.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4IRR2|SAD2_ARATH Importin beta-like SAD2; TrEMBL-Plants: tr|I1N4Z0|I1N4Z0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0547000 LjG1.1_chr1 107670923 107675648 -
4 domain predictions
2 GO terms
LotjaGi1g1v0547000.2
n.a. Importin-like protein; TAIR: AT3G59020.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4J738|SAD2H_ARATH Importin beta-like SAD2 homolog; TrEMBL-Plants: tr|V7B088|V7B088_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0547000 LjG1.1_chr1 107670956 107675678 -
4 domain predictions
2 GO terms
LotjaGi1g1v0547200_LC.2
n.a. Importin-like protein; TAIR: AT3G59020.2 ARM repeat superfamily protein; Swiss-Prot: sp|F4J738|SAD2H_ARATH Importin beta-like SAD2 homolog; TrEMBL-Plants: tr|V7B088|V7B088_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0547200_LC LjG1.1_chr1 107697913 107703589 -
4 domain predictions
2 GO terms
LotjaGi1g1v0547200_LC.4
n.a. Importin-like protein; TAIR: AT3G59020.2 ARM repeat superfamily protein; Swiss-Prot: sp|F4J738|SAD2H_ARATH Importin beta-like SAD2 homolog; TrEMBL-Plants: tr|V7B088|V7B088_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0547200_LC LjG1.1_chr1 107697941 107702784 -
4 domain predictions
2 GO terms
LotjaGi1g1v0557800.10
n.a. Exportin-7; TAIR: AT5G06120.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q5ZLT0|XPO7_CHICK Exportin-7; TrEMBL-Plants: tr|A0A0L9UHI4|A0A0L9UHI4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557800 LjG1.1_chr1 109027657 109028195 -
2 domain predictions
2 GO terms
LotjaGi2g1v0285500.1
n.a. Importin 9; TAIR: AT1G26170.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q91YE6|IPO9_MOUSE Importin-9; TrEMBL-Plants: tr|A0A072TJ92|A0A072TJ92_MEDTR Importin 9; Found in the gene: LotjaGi2g1v0285500 LjG1.1_chr2 75840471 75861903 -
3 domain predictions
2 GO terms
LotjaGi2g1v0449000.1
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94269514 94284180 -
4 domain predictions
2 GO terms
LotjaGi2g1v0449000.2
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94269780 94283994 -
4 domain predictions
2 GO terms
LotjaGi2g1v0449000.3
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270338 94283994 -
4 domain predictions
2 GO terms
LotjaGi2g1v0449000.4
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270342 94283994 -
4 domain predictions
2 GO terms
LotjaGi2g1v0449000.5
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270342 94283994 -
4 domain predictions
2 GO terms
LotjaGi2g1v0449000.6
n.a. Exportin-1; TAIR: AT5G17020.2 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0L9V7V7|A0A0L9V7V7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270342 94283994 -
4 domain predictions
2 GO terms
LotjaGi2g1v0449000.7
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|A0A0S3SEC4|A0A0S3SEC4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449000 LjG1.1_chr2 94270342 94283994 -
4 domain predictions
2 GO terms
LotjaGi3g1v0396900.1
n.a. Exportin-2; TAIR: AT2G46520.1 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter; Swiss-Prot: sp|Q9ZPY7|XPO2_ARATH Exportin-2; TrEMBL-Plants: tr|K7MET7|K7MET7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396900 LjG1.1_chr3 79816393 79821949 +
4 domain predictions
2 GO terms
LotjaGi3g1v0396900.2
n.a. Exportin-2; TAIR: AT2G46520.1 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter; Swiss-Prot: sp|Q9ZPY7|XPO2_ARATH Exportin-2; TrEMBL-Plants: tr|K7MET7|K7MET7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396900 LjG1.1_chr3 79816533 79819460 +
4 domain predictions
2 GO terms
LotjaGi3g1v0538500.1
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|I1LII4|I1LII4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538500 LjG1.1_chr3 95484905 95497810 -
4 domain predictions
2 GO terms
LotjaGi3g1v0538500.2
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|K7LSJ2|K7LSJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538500 LjG1.1_chr3 95486208 95497439 -
4 domain predictions
2 GO terms
LotjaGi3g1v0538500.3
n.a. Exportin-1; TAIR: AT5G17020.1 exportin 1A; Swiss-Prot: sp|Q9SMV6|XPO1A_ARATH Protein EXPORTIN 1A; TrEMBL-Plants: tr|I1LII4|I1LII4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538500 LjG1.1_chr3 95486442 95497439 -
4 domain predictions
2 GO terms
LotjaGi4g1v0242600.1
n.a. Transportin-3; TAIR: AT5G62600.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q8GUL2|MOS14_ARATH Transportin MOS14; TrEMBL-Plants: tr|A0A0L9TRZ7|A0A0L9TRZ7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0242600 LjG1.1_chr4 59107098 59120115 -
2 domain predictions
2 GO terms
LotjaGi4g1v0311900.1
n.a. Importin beta-like SAD2-like protein; TAIR: AT3G17340.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4J738|SAD2H_ARATH Importin beta-like SAD2 homolog; TrEMBL-Plants: tr|A0A151SSC8|A0A151SSC8_CAJCA Putative importin-7 isogeny; Found in the gene: LotjaGi4g1v0311900 LjG1.1_chr4 68841061 68851649 -
4 domain predictions
2 GO terms
LotjaGi4g1v0311900.2
n.a. Importin beta-like SAD2-like protein; TAIR: AT3G17340.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4J738|SAD2H_ARATH Importin beta-like SAD2 homolog; TrEMBL-Plants: tr|I1MRW2|I1MRW2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0311900 LjG1.1_chr4 68842156 68851579 -
4 domain predictions
2 GO terms
LotjaGi4g1v0376600.1
n.a. Importin-5; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O00410|IPO5_HUMAN Importin-5; TrEMBL-Plants: tr|I1KSC8|I1KSC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0376600 LjG1.1_chr4 75562541 75569098 +
2 domain predictions
2 GO terms
LotjaGi4g1v0437800.1
n.a. Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|I1KPN2|I1KPN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437800 LjG1.1_chr4 81095241 81100251 -
4 domain predictions
2 GO terms
LotjaGi4g1v0437800.2
n.a. Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|I1KPN2|I1KPN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437800 LjG1.1_chr4 81096366 81099066 -
4 domain predictions
2 GO terms
LotjaGi5g1v0350400.1
n.a. Importin beta-1, putative; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A151TQB2|A0A151TQB2_CAJCA Transportin-1; Found in the gene: LotjaGi5g1v0350400 LjG1.1_chr5 66630987 66648951 +
4 domain predictions
2 GO terms
LotjaGi5g1v0350400.2
n.a. Importin beta-1, putative; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A0B2RSI8|A0A0B2RSI8_GLYSO Transportin-1; Found in the gene: LotjaGi5g1v0350400 LjG1.1_chr5 66631254 66648097 +
2 domain predictions
2 GO terms
LotjaGi5g1v0350400.3
n.a. Transportin-1; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A151TQB2|A0A151TQB2_CAJCA Transportin-1; Found in the gene: LotjaGi5g1v0350400 LjG1.1_chr5 66631254 66648097 +
2 domain predictions
2 GO terms
LotjaGi5g1v0350400.4
n.a. Importin beta-1, putative; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A151TQB2|A0A151TQB2_CAJCA Transportin-1; Found in the gene: LotjaGi5g1v0350400 LjG1.1_chr5 66631254 66648097 +
2 domain predictions
2 GO terms
LotjaGi5g1v0365400.1
n.a. Importin-like protein; TAIR: AT2G31660.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4IRR2|SAD2_ARATH Importin beta-like SAD2; TrEMBL-Plants: tr|I1KWS2|I1KWS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0365400 LjG1.1_chr5 67998753 68015368 +
4 domain predictions
2 GO terms