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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2482400 |
| Transcript ID | Lj1g3v2482400.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like [Cicer arietinum] gi|502104491|ref|XP_004492557.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 18 | 16 | 4.60E-256 | – | |
| PANTHER | 3 | 18 | 16 | 4.60E-256 | – | |
| PANTHER | 48 | 528 | 481 | 4.60E-256 | – | |
| PANTHER | 48 | 528 | 481 | 4.60E-256 | – | |
| ProSiteProfiles | 114 | 148 | 35 | 6.884 | ||
| Pfam | 146 | 174 | 29 | 1.30E-08 | ||
| ProSiteProfiles | 149 | 183 | 35 | 10.852 | ||
| TIGRFAM | 151 | 185 | 35 | 3.10E-07 | ||
| Gene3D | 153 | 391 | 239 | 3.10E-08 | ||
| Pfam | 179 | 211 | 33 | 4.80E-08 | ||
| ProSiteProfiles | 184 | 218 | 35 | 11.488 | ||
| TIGRFAM | 187 | 218 | 32 | 4.50E-06 | ||
| Pfam | 218 | 267 | 50 | 6.00E-14 | ||
| ProSiteProfiles | 219 | 253 | 35 | 9.295 | ||
| TIGRFAM | 222 | 255 | 34 | 1.50E-04 | ||
| ProSiteProfiles | 254 | 288 | 35 | 12.978 | ||
| TIGRFAM | 256 | 290 | 35 | 1.10E-08 | ||
| Pfam | 288 | 337 | 50 | 2.00E-13 | ||
| ProSiteProfiles | 289 | 323 | 35 | 12.595 | ||
| TIGRFAM | 291 | 325 | 35 | 3.10E-09 | ||
| ProSiteProfiles | 324 | 358 | 35 | 9.405 | ||
| TIGRFAM | 326 | 359 | 34 | 2.00E-06 | ||
| ProSiteProfiles | 359 | 398 | 40 | 7.706 | ||
| Pfam | 378 | 396 | 19 | 0.038 | ||
| ProSiteProfiles | 399 | 433 | 35 | 9.251 | ||
| ProSiteProfiles | 434 | 468 | 35 | 8.55 | ||
| Pfam | 436 | 462 | 27 | 0.092 | ||
| ProSiteProfiles | 469 | 503 | 35 | 8.122 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2482400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2482400.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.