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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2581180 |
| Transcript ID | Lj1g3v2581180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like isoform X1 [Cicer arietinum] gi|502104762|ref|XP_004492640.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 45 | 408 | 364 | 3.20E-167 | – | |
| PANTHER | 45 | 408 | 364 | 3.20E-167 | – | |
| Pfam | 160 | 293 | 134 | 1.30E-07 | ||
| ProSiteProfiles | 170 | 204 | 35 | 9.295 | ||
| Gene3D | 174 | 301 | 128 | 1.70E-07 | ||
| TIGRFAM | 174 | 205 | 32 | 2.00E-04 | ||
| ProSiteProfiles | 205 | 239 | 35 | 9.306 | ||
| TIGRFAM | 208 | 238 | 31 | 5.80E-04 | ||
| ProSiteProfiles | 240 | 274 | 35 | 10.128 | ||
| TIGRFAM | 243 | 273 | 31 | 2.90E-05 | ||
| ProSiteProfiles | 275 | 309 | 35 | 9.591 | ||
| ProSiteProfiles | 310 | 344 | 35 | 9.953 | ||
| TIGRFAM | 314 | 345 | 32 | 3.80E-04 | ||
| Pfam | 316 | 342 | 27 | 0.011 | ||
| ProSiteProfiles | 345 | 379 | 35 | 5.974 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2581180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2581180.1, powered by CORGI.
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