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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2611620 |
| Transcript ID | Lj1g3v2611620.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Rpp4 candidate R5 [Glycine max] gi|328447250|gb|AEB06128.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 283 | 276 | 6.00E-225 | – | |
| PANTHER | 8 | 283 | 276 | 6.00E-225 | – | |
| Coils | 32 | 63 | 32 | – | – | |
| SUPERFAMILY | 153 | 269 | 117 | 1.54E-44 | ||
| Coils | 155 | 175 | 21 | – | – | |
| Gene3D | 161 | 272 | 112 | 1.80E-13 | ||
| Pfam | 162 | 282 | 121 | 6.30E-18 | ||
| SMART | 176 | 383 | 208 | 2.80E-04 | ||
| PRINTS | 179 | 194 | 16 | 1.30E-17 | – | |
| PRINTS | 253 | 267 | 15 | 1.30E-17 | – | |
| PANTHER | 330 | 741 | 412 | 6.00E-225 | – | |
| PANTHER | 330 | 741 | 412 | 6.00E-225 | – | |
| SUPERFAMILY | 331 | 461 | 131 | 1.54E-44 | ||
| Pfam | 331 | 465 | 135 | 9.80E-17 | ||
| PRINTS | 397 | 411 | 15 | 1.30E-17 | – | |
| SUPERFAMILY | 520 | 929 | 410 | 3.91E-30 | ||
| Gene3D | 555 | 729 | 175 | 1.40E-20 | ||
| PRINTS | 670 | 686 | 17 | 1.30E-17 | – | |
| PANTHER | 822 | 853 | 32 | 6.00E-225 | – | |
| PANTHER | 822 | 853 | 32 | 6.00E-225 | – | |
| Gene3D | 835 | 922 | 88 | 1.10E-16 | ||
| SUPERFAMILY | 1000 | 1241 | 242 | 2.98E-15 | – | |
| Gene3D | 1001 | 1157 | 157 | 1.10E-16 | ||
| Gene3D | 1194 | 1240 | 47 | 1.10E-16 | ||
| Gene3D | 1254 | 1561 | 308 | 1.10E-08 | ||
| SUPERFAMILY | 1321 | 1561 | 241 | 2.38E-11 | ||
| SUPERFAMILY | 1617 | 1807 | 191 | 1.16E-09 | ||
| Gene3D | 1621 | 1661 | 41 | 5.50E-05 | ||
| PANTHER | 1696 | 1753 | 58 | 6.00E-225 | – | |
| PANTHER | 1696 | 1753 | 58 | 6.00E-225 | – | |
| Gene3D | 1698 | 1746 | 49 | 5.50E-05 | ||
| Gene3D | 1850 | 2046 | 197 | 6.50E-09 | ||
| SUPERFAMILY | 1858 | 2074 | 217 | 1.16E-09 | ||
| PANTHER | 2061 | 2084 | 24 | 6.00E-225 | – | |
| PANTHER | 2061 | 2084 | 24 | 6.00E-225 | – | |
| SUPERFAMILY | 2129 | 2387 | 259 | 7.14E-08 | ||
| Gene3D | 2141 | 2237 | 97 | 6.50E-09 | ||
| Coils | 2435 | 2437 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj1g3v2611620.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2611620.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.