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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2862760 |
| Transcript ID | Lj1g3v2862760.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356530005|ref|XP_003533576.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 22 | 295 | 274 | 8.10E-132 | – | |
| PANTHER | 22 | 295 | 274 | 8.10E-132 | – | |
| MobiDBLite | 71 | 98 | 28 | – | – | |
| SUPERFAMILY | 103 | 175 | 73 | 1.67E-14 | ||
| Gene3D | 103 | 176 | 74 | 1.30E-15 | ||
| SMART | 105 | 180 | 76 | 2.20E-11 | ||
| ProSiteProfiles | 106 | 172 | 67 | 15.598 | ||
| Pfam | 109 | 173 | 65 | 4.40E-13 | ||
| CDD | 109 | 159 | 51 | 5.09E-13 | – | |
| SUPERFAMILY | 192 | 281 | 90 | 5.55E-12 | ||
| SMART | 198 | 275 | 78 | 2.60E-06 | ||
| ProSiteProfiles | 199 | 270 | 72 | 13.984 | ||
| Gene3D | 200 | 279 | 80 | 1.00E-14 | ||
| Pfam | 201 | 270 | 70 | 2.10E-10 | ||
| CDD | 201 | 270 | 70 | 5.94E-16 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of Lj1g3v2862760.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2862760.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.