Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd02396

Source: CDD

Description

PCBP_like_KH

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 50

Transcript Name Description Predicted domains Domain count
Lj0g3v0243119.1
– PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like [Cucumis sativus] gi|449463577|ref|XP_004149510.1|
Domains
10
Lj1g3v0986640.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356516077|ref|XP_003526723.1|
Domains
12
Lj1g3v2095550.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356507955|ref|XP_003522728.1|
Domains
13
Lj1g3v2095550.2
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356507955|ref|XP_003522728.1|
Domains
13
Lj1g3v2862760.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356530005|ref|XP_003533576.1|
Domains
12
Lj1g3v2862760.2
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356530005|ref|XP_003533576.1|
Domains
11
Lj1g3v2979180.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356531744|ref|XP_003534436.1|
Domains
11
Lj1g3v4479240.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356572245|ref|XP_003554280.1|
Domains
12
Lj1g3v4479240.2
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356572245|ref|XP_003554280.1|
Domains
12
Lj1g3v4995150.1
– PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera] gi|225463940|ref|XP_002269249.1|
Domains
11
Lj1g3v4997240.1
– PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like [Glycine max] gi|356573119|ref|XP_003554712.1|
Domains
12
Lj1g3v4997250.1
– PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera] gi|225463940|ref|XP_002269249.1|
Domains
11
Lj2g3v1068380.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356572762|ref|XP_003554535.1|
Domains
11
Lj2g3v1455300.1
– PREDICTED: KH domain-containing protein At4g18375-like [Cicer arietinum] gi|502162652|ref|XP_004512570.1|
Domains
12
Lj3g3v2057520.1
– PREDICTED: KH domain-containing protein At4g18375-like [Cicer arietinum] gi|502148055|ref|XP_004507020.1|
Domains
10
Lj4g3v0385920.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356519471|ref|XP_003528396.1|
Domains
12
Lj4g3v2139160.1
– PREDICTED: KH domain-containing protein At4g18375-like [Cicer arietinum] gi|502150323|ref|XP_004507898.1|
Domains
12
Lj4g3v2468420.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356525090|ref|XP_003531160.1|
Domains
12
Lj4g3v2468420.2
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356525090|ref|XP_003531160.1|
Domains
12
Lj5g3v1027080.1
– PREDICTED: poly(rC)-binding protein 1-like [Glycine max] gi|356536806|ref|XP_003536925.1|
Domains
13
Lj5g3v1699070.2
– PREDICTED: RNA-binding protein Nova-1-like [Glycine max] gi|356535513|ref|XP_003536289.1|
Domains
12
Lj5g3v1699070.3
– PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer arietinum] gi|502118184|ref|XP_004496141.1|
Domains
12
Lj6g3v1331880.1
–
Domains
11
Lj6g3v1331890.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356556240|ref|XP_003546434.1|
Domains
15
Lj6g3v1946390.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356525090|ref|XP_003531160.1|
Domains
11
Lj6g3v1946390.2
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356525090|ref|XP_003531160.1|
Domains
12
Lj6g3v2193420.1
– PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] gi|356557593|ref|XP_003547100.1|
Domains
11
LotjaGi1g1v0288000.1
– KH domain-containing protein; TAIR: AT5G53060.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|K7KUU1|K7KUU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0288000
Domains
14
LotjaGi1g1v0411200.1
– KH domain-containing protein family; TAIR: AT1G51580.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|V7AXD5|V7AXD5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0411200
Domains
15
LotjaGi1g1v0488800.1
– RNA-binding KH domain protein; TAIR: AT5G15270.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4; TrEMBL-Plants: tr|A0A0S3RSA7|A0A0S3RSA7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0488800
Domains
13
LotjaGi1g1v0488800.2
– RNA-binding KH domain protein; TAIR: AT5G15270.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SZH4|PEP_ARATH RNA-binding KH domain-containing protein PEPPER; TrEMBL-Plants: tr|A0A0R0IMX4|A0A0R0IMX4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0488800
Domains
12
LotjaGi1g1v0712300.1
– RNA-binding KH domain-containing protein; TAIR: AT3G04610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|I1N9N6|I1N9N6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0712300
Domains
14
LotjaGi1g1v0782800.1
– RNA-binding KH domain-containing protein; TAIR: AT3G04610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|I1NCB1|I1NCB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0782800
Domains
14
LotjaGi1g1v0782800.2
– RNA-binding KH domain-containing protein; TAIR: AT3G04610.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|I1NCB1|I1NCB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0782800
Domains
14
LotjaGi2g1v0260400.1
– KH domain-containing protein; TAIR: AT5G15270.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1N665|I1N665_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260400
Domains
12
LotjaGi2g1v0260400.2
– KH domain-containing protein; TAIR: AT5G15270.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1N665|I1N665_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260400
Domains
12
LotjaGi2g1v0260400.3
– KH domain-containing protein; TAIR: AT5G15270.3 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|A0A1J7IC78|A0A1J7IC78_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0260400
Domains
12
LotjaGi2g1v0328700.1
– RNA-binding KH domain protein; TAIR: AT2G22600.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|V7CJP6|V7CJP6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0328700
Domains
14
LotjaGi3g1v0345500.1
– KH domain-containing protein family; TAIR: AT5G64390.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|F4KDN0|HEN4_ARATH KH domain-containing protein HEN4; TrEMBL-Plants: tr|V7B896|V7B896_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0345500
Domains
14
LotjaGi4g1v0040000.1
– RNA-binding KH domain protein; TAIR: AT1G51580.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q8W4B1|RCF3_ARATH RNA-binding KH domain-containing protein RCF3; TrEMBL-Plants: tr|I1KL57|I1KL57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0040000
Domains
14
LotjaGi4g1v0305900.1
– Poly(RC)-binding-like protein; TAIR: AT4G26000.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SZH4|PEP_ARATH RNA-binding KH domain-containing protein PEPPER; TrEMBL-Plants: tr|A0A151T5F8|A0A151T5F8_CAJCA Poly(RC)-binding protein 3; Found in the gene: LotjaGi4g1v0305900
Domains
13
LotjaGi4g1v0360700.1
– KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1KRV4|I1KRV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0360700
Domains
13
LotjaGi4g1v0360700.2
– KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1KRV4|I1KRV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0360700
Domains
13
LotjaGi4g1v0360700.3
– KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|I1KRV4|I1KRV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0360700
Domains
13
LotjaGi5g1v0177100.1
– RNA-binding KH domain-containing protein; TAIR: AT3G04610.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SR13|FLK_ARATH Flowering locus K homology domain; TrEMBL-Plants: tr|A0A0L9TX81|A0A0L9TX81_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0177100
Domains
15
LotjaGi5g1v0253700.1
– RNA-binding KH domain protein; TAIR: AT5G04430.2 binding to TOMV RNA 1L (long form); Swiss-Prot: sp|Q9LZ82|BTR1_ARATH Protein BTR1; TrEMBL-Plants: tr|A0A151T0U1|A0A151T0U1_CAJCA RNA-binding protein Nova-1; Found in the gene: LotjaGi5g1v0253700
Domains
13
LotjaGi5g1v0253700.2
– RNA-binding KH domain protein; TAIR: AT5G04430.2 binding to TOMV RNA 1L (long form); Swiss-Prot: sp|Q9LZ82|BTR1_ARATH Protein BTR1; TrEMBL-Plants: tr|I1LCN2|I1LCN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0253700
Domains
13
LotjaGi6g1v0235300.1
– Poly(RC)-binding-like protein; TAIR: AT4G26000.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|Q9SZH4|PEP_ARATH RNA-binding KH domain-containing protein PEPPER; TrEMBL-Plants: tr|K7MBU6|K7MBU6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0235300
Domains
13
LotjaGi6g1v0311200.1
– KH domain-containing protein; TAIR: AT5G46190.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375; TrEMBL-Plants: tr|A0A1J7I5W2|A0A1J7I5W2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0311200
Domains
13
LotjaGi6g1v0349100.1
– RNA-binding KH domain protein; TAIR: AT1G51580.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|F4KDN0|HEN4_ARATH KH domain-containing protein HEN4; TrEMBL-Plants: tr|K7M1V9|K7M1V9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0349100
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.00