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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2921640 |
| Transcript ID | Lj1g3v2921640.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502106343|ref|XP_004492921.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | – | – | |
| Phobius | 1 | 37 | 37 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| PANTHER | 14 | 796 | 783 | 0 | ||
| PANTHER | 14 | 796 | 783 | 0 | – | |
| Phobius | 17 | 32 | 16 | – | – | |
| Phobius | 33 | 37 | 5 | – | – | |
| Phobius | 38 | 798 | 761 | – | – | |
| Gene3D | 39 | 109 | 71 | 4.30E-04 | ||
| Pfam | 42 | 126 | 85 | 8.70E-15 | ||
| Gene3D | 110 | 172 | 63 | 9.80E-73 | ||
| CDD | 123 | 618 | 496 | 1.35E-121 | – | |
| SUPERFAMILY | 125 | 171 | 47 | 7.72E-72 | ||
| PRINTS | 151 | 170 | 20 | 2.00E-10 | ||
| Pfam | 151 | 646 | 496 | 2.80E-38 | ||
| SUPERFAMILY | 201 | 400 | 200 | 7.72E-72 | ||
| Gene3D | 210 | 368 | 159 | 9.80E-73 | ||
| PRINTS | 231 | 244 | 14 | 2.00E-10 | ||
| CDD | 375 | 482 | 108 | 3.57E-25 | – | |
| Gene3D | 404 | 471 | 68 | 4.40E-04 | – | |
| Gene3D | 523 | 658 | 136 | 9.80E-73 | ||
| SUPERFAMILY | 529 | 658 | 130 | 7.72E-72 | ||
| PRINTS | 583 | 599 | 17 | 2.00E-10 | ||
| ProSitePatterns | 584 | 594 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj1g3v2921640.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2921640.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.