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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2979320 |
| Transcript ID | Lj1g3v2979320.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phosphate transporter PHO1 homolog 9-like [Glycine max] gi|356568688|ref|XP_003552542.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 55 | 55 | 0 | – | |
| Phobius | 1 | 373 | 373 | – | – | |
| PANTHER | 1 | 55 | 55 | 0 | – | |
| Pfam | 1 | 325 | 325 | 1.70E-53 | ||
| ProSiteProfiles | 1 | 323 | 323 | 29.775 | ||
| CDD | 2 | 319 | 318 | 3.26E-45 | – | |
| PANTHER | 85 | 169 | 85 | 0 | – | |
| PANTHER | 85 | 169 | 85 | 0 | – | |
| Coils | 127 | 154 | 28 | – | – | |
| CDD | 252 | 311 | 60 | 6.62E-05 | – | |
| PANTHER | 265 | 777 | 513 | 0 | – | |
| PANTHER | 265 | 777 | 513 | 0 | – | |
| TMHMM | 374 | 396 | 23 | – | – | |
| Phobius | 374 | 397 | 24 | – | – | |
| Phobius | 398 | 416 | 19 | – | – | |
| Pfam | 415 | 752 | 338 | 1.90E-80 | ||
| TMHMM | 416 | 438 | 23 | – | – | |
| Phobius | 417 | 438 | 22 | – | – | |
| Phobius | 439 | 458 | 20 | – | – | |
| Phobius | 459 | 478 | 20 | – | – | |
| TMHMM | 459 | 481 | 23 | – | – | |
| Phobius | 479 | 497 | 19 | – | – | |
| TMHMM | 496 | 518 | 23 | – | – | |
| Phobius | 498 | 519 | 22 | – | – | |
| Phobius | 520 | 585 | 66 | – | – | |
| ProSiteProfiles | 582 | 777 | 196 | 23.813 | ||
| TMHMM | 586 | 603 | 18 | – | – | |
| Phobius | 586 | 605 | 20 | – | – | |
| Phobius | 606 | 616 | 11 | – | – | |
| Phobius | 617 | 637 | 21 | – | – | |
| Phobius | 638 | 648 | 11 | – | – | |
| Phobius | 649 | 674 | 26 | – | – | |
| Phobius | 675 | 693 | 19 | – | – | |
| Phobius | 694 | 714 | 21 | – | – | |
| Phobius | 715 | 777 | 63 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj1g3v2979320.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2979320.2, powered by CORGI.
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