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Lj1g3v3116520.1

Overview

Field Value
Gene ID Lj1g3v3116520
Transcript ID Lj1g3v3116520.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable disease resistance protein At4g27220-like [Glycine max] gi|356567184|ref|XP_003551801.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23155
4 352 349 4.90E-103 –
PANTHER
PTHR23155:SF497
4 352 349 4.90E-103 –
Pfam
PF00931
7 190 184 2.70E-39
IPR002182
Coils
Coil
8 28 21 – –
SUPERFAMILY
SSF52540
9 185 177 3.25E-28
IPR027417
PRINTS
PR00364
22 36 15 1.10E-10 –
PRINTS
PR00364
119 133 15 1.10E-10 –
SUPERFAMILY
SSF52058
289 354 66 1.46E-07
IPR032675
Gene3D
G3DSA:3.80.10.10
296 354 59 1.90E-07
IPR032675
Pfam
PF13855
307 354 48 1.00E-08
IPR001611
PRINTS
PR00364
326 342 17 1.10E-10 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj1g3v3116520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3116520.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.