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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3458570 |
| Transcript ID | Lj1g3v3458570.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| PANTHER | 5 | 543 | 539 | 1.20E-269 | – | |
| PANTHER | 5 | 543 | 539 | 1.20E-269 | – | |
| Phobius | 19 | 30 | 12 | – | – | |
| Phobius | 31 | 35 | 5 | – | – | |
| Phobius | 36 | 547 | 512 | – | – | |
| ProSiteProfiles | 132 | 167 | 36 | 6.544 | ||
| ProSiteProfiles | 168 | 203 | 36 | 7.673 | ||
| Pfam | 203 | 246 | 44 | 8.70E-12 | ||
| ProSiteProfiles | 204 | 238 | 35 | 11.882 | ||
| TIGRFAM | 206 | 240 | 35 | 9.10E-09 | ||
| ProSiteProfiles | 239 | 273 | 35 | 10.874 | ||
| TIGRFAM | 241 | 275 | 35 | 1.40E-04 | ||
| Gene3D | 255 | 476 | 222 | 4.70E-04 | ||
| Pfam | 273 | 322 | 50 | 2.20E-17 | ||
| ProSiteProfiles | 274 | 308 | 35 | 13.318 | ||
| TIGRFAM | 277 | 310 | 34 | 1.00E-09 | ||
| ProSiteProfiles | 309 | 343 | 35 | 12.627 | ||
| TIGRFAM | 311 | 344 | 34 | 6.60E-09 | ||
| ProSiteProfiles | 344 | 374 | 31 | 6.292 | ||
| ProSiteProfiles | 378 | 408 | 31 | 7.311 | ||
| Pfam | 383 | 405 | 23 | 0.0055 | ||
| ProSiteProfiles | 412 | 446 | 35 | 12.266 | ||
| Pfam | 414 | 460 | 47 | 5.50E-18 | ||
| TIGRFAM | 415 | 448 | 34 | 2.70E-07 | ||
| ProSiteProfiles | 447 | 481 | 35 | 13.658 | ||
| TIGRFAM | 449 | 482 | 34 | 2.30E-10 | ||
| ProSiteProfiles | 482 | 517 | 36 | 6.029 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v3458570.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3458570.1, powered by CORGI.
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