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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3476140 |
| Transcript ID | Lj1g3v3476140.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable pectate lyase 8-like [Cicer arietinum] gi|502174836|ref|XP_004515610.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| PANTHER | 22 | 433 | 412 | 0 | – | |
| PANTHER | 22 | 433 | 412 | 0 | – | |
| Phobius | 24 | 433 | 410 | – | – | |
| SUPERFAMILY | 63 | 427 | 365 | 5.34E-100 | ||
| Gene3D | 85 | 424 | 340 | 6.00E-129 | ||
| PRINTS | 107 | 124 | 18 | 7.90E-85 | ||
| PRINTS | 131 | 156 | 26 | 7.90E-85 | ||
| SMART | 159 | 356 | 198 | 1.40E-101 | ||
| Pfam | 167 | 348 | 182 | 7.50E-20 | ||
| PRINTS | 167 | 183 | 17 | 7.90E-85 | ||
| PRINTS | 231 | 252 | 22 | 7.90E-85 | ||
| PRINTS | 311 | 330 | 20 | 7.90E-85 | ||
| PRINTS | 333 | 352 | 20 | 7.90E-85 | ||
| PRINTS | 375 | 399 | 25 | 7.90E-85 | ||
| PRINTS | 404 | 427 | 24 | 7.90E-85 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v3476140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3476140.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.