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Lj1g3v3832560.1

Overview

Field Value
Gene ID Lj1g3v3832560
Transcript ID Lj1g3v3832560.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATXR6-like [Cicer arietinum] gi|502124379|ref|XP_004498502.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 30 30 – –
Gene3D
G3DSA:3.30.40.10
18 83 66 4.50E-17
IPR013083
SUPERFAMILY
SSF57903
22 85 64 1.62E-16
IPR011011
ProSiteProfiles
PS50016
30 80 51 9.365
IPR019787
PANTHER
PTHR10615:SF112
30 102 73 1.10E-91 –
PANTHER
PTHR10615
30 102 73 1.10E-91 –
SMART
SM00249
32 78 47 3.90E-09
IPR001965
CDD
cd15545
33 77 45 5.11E-18 –
Pfam
PF00628
33 79 47 5.00E-09
IPR019787
MobiDBLite
mobidb-lite
104 125 22 – –
PANTHER
PTHR10615:SF112
124 222 99 1.10E-91 –
PANTHER
PTHR10615
124 222 99 1.10E-91 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj1g3v3832560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3832560.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.