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Lj1g3v3834320.2

Overview

Field Value
Gene ID Lj1g3v3834320
Transcript ID Lj1g3v3834320.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max] gi|356558725|ref|XP_003547653.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
51 77 27 – –
SUPERFAMILY
SSF52540
76 275 200 1.52E-48
IPR027417
PANTHER
PTHR10285
78 491 414 0 –
PANTHER
PTHR10285:SF71
78 491 414 0
IPR029930
Gene3D
G3DSA:3.40.50.300
79 277 199 1.80E-76
IPR027417
PRINTS
PR00988
82 99 18 2.10E-31
IPR000764
TIGRFAM
TIGR00235
83 282 200 8.00E-73
IPR000764
Pfam
PF00485
84 270 187 3.70E-46
IPR006083
CDD
cd02023
84 282 199 1.68E-108 –
PRINTS
PR00988
112 123 12 2.10E-31
IPR000764
PRINTS
PR00988
157 172 16 2.10E-31
IPR000764
PRINTS
PR00988
214 224 11 2.10E-31
IPR000764
PRINTS
PR00988
228 239 12 2.10E-31
IPR000764
PRINTS
PR00988
250 263 14 2.10E-31
IPR000764
Gene3D
G3DSA:3.40.50.2020
281 502 222 1.40E-100
IPR029057
SUPERFAMILY
SSF53271
285 502 218 1.24E-62
IPR029057
Pfam
PF14681
300 501 202 2.90E-72
IPR029057
CDD
cd06223
359 474 116 1.95E-13
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj1g3v3834320.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3834320.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.